PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00012_0020

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

MYB_related

Protein Properties

Length: 1257aa MW: 133829 Da PI: 10.7214

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00012_0020	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25	4.4e-08	35	70	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 +WT+ E e + ++ +q+G+ W+ +a ++ +R++++c kfl00012_0020 35 PWTPAEVEAFFHGQQQHGTA-WEHVAGLVQ-TRSAEEC 70 8*****************.*****.****9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	8.58E-8	30	80	IPR009057	Homeodomain-like
SMART	SM00717	0.0021	32	80	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	1.3E-5	34	70	IPR009057	Homeodomain-like
Pfam	PF00249	1.5E-6	35	70	IPR001005	SANT/Myb domain
CDD	cd00167	2.43E-5	35	70	No hit	No description
PRINTS	PR01217	7.1E-12	414	426	No hit	No description
PRINTS	PR01217	7.1E-12	467	488	No hit	No description
PRINTS	PR01217	7.1E-12	489	505	No hit	No description
PRINTS	PR01217	7.1E-12	519	536	No hit	No description
PRINTS	PR01217	7.1E-12	589	614	No hit	No description
SMART	SM01135	2.5E-40	708	807	IPR033471	DIRP domain
Pfam	PF06584	2.2E-27	708	806	IPR033471	DIRP domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005730	Cellular Component	nucleolus
GO:0016592	Cellular Component	mediator complex
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1257 aa Download sequence Send to blast
MASARKHKRQ SLDGPSQDTP ARSKKRKMSD LLGSPWTPAE VEAFFHGQQQ HGTAWEHVAG 60 LVQTRSAEEC GALFTLFKTY LSLPEGAKSV QGLTAMMTDH FNSLQEDSEP ESSTGGRERT 120 PEPTPRRAPG GTPTRSPGQL PRPAKRARTV VPVGRRTPRP LPQPSGDLLR TPPRATRSLT 180 ADARSPPQSG ESRQLRPRDL SRSPIRDRAQ LLRGKAGGSP GKVAPRDGGS KHGGLKQIMK 240 ALEAVEEQEN KKGRKADGAG GPAAPVRKPG ALSKKAHILA KVQAQRSVSS GEEKAGSQAE 300 LEDNASSGRA GGTDGRSSDE ERPPPQQERP TVGGTGRGRV ESEPEEDVPI MKRRDLASPQ 360 AERRPLKKRK SEEWGRSRDG AAEPDSGSEA TRSDDLPIIG GGRDSKAVTS KQATPQRKTP 420 RKGPEAFQGA ASGLDVLSSV VVAVHRQVAP APRHPPRAPA SPAKLRPAAT PPCPKPSPAK 480 PKPKAKPKAT PEKAPPPRAV SPEDSPADLP ILPAKPKEKP STAKAPPSPK PAGSSPPAGG 540 SPAKAKGGKP GGAKDKAASG ADAASRSEDA PLAPPQQRKR KRKPGVEKLP PVPPLPEMKE 600 VEKKPRPRPR PRPPPSSPAQ KSPAPAAQPA GSTDTQENTP LKARNKKKPA RPASQRLGAL 660 TFASPPPPRP PAHCSHTDHS EGPAHSRKAH LLHCLNSRVR RWCLYEWFYS ALDYPWFARN 720 EFVEYLEHAG LGGVKRLTRT EWGVIRSSLG HPRRLSSVFL REEREKLAAY REAARAAYAE 780 AGQGGDVPAE LPAPLAVGQR VTAKHPRTRQ IAEGAILTVD AKGRSRVQFD RRELASEIVQ 840 DIDMMPADPL KNMPATLRKK RLEMLMEART RDHTPGELLV LRLEPLMAAA DSQSAVALAK 900 QATAEAMSAA LAEPGTPPAS PRTDAAAQAT RDKDVKVLAD LQRALDKKAA LLAEMAHVTA 960 DAERRTAEAG SSEAAQAGTE DDALREGLAK KVLALEQVNK QVEQCVVRLR QRNRYADPAS 1020 PAWVHANGGP GQPRGGQPAT PREDLPPKPI GEMAASARRQ ARAMVAQVVA ALQSAGEGED 1080 PMLVLEALGP QLGLDDKFNR RLQPGARGGT SAAGPHAVPG ILGTSRAAGR VNWAEAAAAA 1140 HSVADTGYGD AARSKAAAVP GDPLTGLEVG GHARSKEGGF LSELMASCVA TLLMIQQCTD 1200 RALPQQDTVL TLDSAIASLK PHAQHNQRVW KEIESCINTI KGQILTQIPY QQLPASY

Sequence ? help Back to Top

Protein Sequence Length: 1257 aa Download sequence Send to blast

MASARKHKRQ SLDGPSQDTP ARSKKRKMSD LLGSPWTPAE VEAFFHGQQQ HGTAWEHVAG  60
LVQTRSAEEC GALFTLFKTY LSLPEGAKSV QGLTAMMTDH FNSLQEDSEP ESSTGGRERT  120
PEPTPRRAPG GTPTRSPGQL PRPAKRARTV VPVGRRTPRP LPQPSGDLLR TPPRATRSLT  180
ADARSPPQSG ESRQLRPRDL SRSPIRDRAQ LLRGKAGGSP GKVAPRDGGS KHGGLKQIMK  240
ALEAVEEQEN KKGRKADGAG GPAAPVRKPG ALSKKAHILA KVQAQRSVSS GEEKAGSQAE  300
LEDNASSGRA GGTDGRSSDE ERPPPQQERP TVGGTGRGRV ESEPEEDVPI MKRRDLASPQ  360
AERRPLKKRK SEEWGRSRDG AAEPDSGSEA TRSDDLPIIG GGRDSKAVTS KQATPQRKTP  420
RKGPEAFQGA ASGLDVLSSV VVAVHRQVAP APRHPPRAPA SPAKLRPAAT PPCPKPSPAK  480
PKPKAKPKAT PEKAPPPRAV SPEDSPADLP ILPAKPKEKP STAKAPPSPK PAGSSPPAGG  540
SPAKAKGGKP GGAKDKAASG ADAASRSEDA PLAPPQQRKR KRKPGVEKLP PVPPLPEMKE  600
VEKKPRPRPR PRPPPSSPAQ KSPAPAAQPA GSTDTQENTP LKARNKKKPA RPASQRLGAL  660
TFASPPPPRP PAHCSHTDHS EGPAHSRKAH LLHCLNSRVR RWCLYEWFYS ALDYPWFARN  720
EFVEYLEHAG LGGVKRLTRT EWGVIRSSLG HPRRLSSVFL REEREKLAAY REAARAAYAE  780
AGQGGDVPAE LPAPLAVGQR VTAKHPRTRQ IAEGAILTVD AKGRSRVQFD RRELASEIVQ  840
DIDMMPADPL KNMPATLRKK RLEMLMEART RDHTPGELLV LRLEPLMAAA DSQSAVALAK  900
QATAEAMSAA LAEPGTPPAS PRTDAAAQAT RDKDVKVLAD LQRALDKKAA LLAEMAHVTA  960
DAERRTAEAG SSEAAQAGTE DDALREGLAK KVLALEQVNK QVEQCVVRLR QRNRYADPAS  1020
PAWVHANGGP GQPRGGQPAT PREDLPPKPI GEMAASARRQ ARAMVAQVVA ALQSAGEGED  1080
PMLVLEALGP QLGLDDKFNR RLQPGARGGT SAAGPHAVPG ILGTSRAAGR VNWAEAAAAA  1140
HSVADTGYGD AARSKAAAVP GDPLTGLEVG GHARSKEGGF LSELMASCVA TLLMIQQCTD  1200
RALPQQDTVL TLDSAIASLK PHAQHNQRVW KEIESCINTI KGQILTQIPY QQLPASY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	351	369	KRRDLASPQAERRPLKKRK
2	577	582	RKRKRK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1HIN8	0.0	A0A1Y1HIN8_KLENI; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP2479	13	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	1e-54	DNA binding