PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00001_0850
Common NameKFL_000010850
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family DBB
Protein Properties Length: 347aa    MW: 36287.8 Da    PI: 5.4141
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00001_0850genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box19.42.2e-06447542
       zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                    C+ +e+  +   C  ++  lC dC    H        H++vpl
  kfl00001_0850  4 QCDACENAVAAVMCCADEAALCVDCDKRVHAAnrlankHQRVPL 47
                   7*****************************66789999999986 PP
2zf-B_box29.31.7e-095495338
       zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                     kC+ ++e  + +fC +++ llC+dC  ++H        Ht
  kfl00001_0850 54 GSKCDICQEGAAFFFCLEDRALLCRDCDISIHTAndlarkHT 95
                   679******88*********************5566777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.239147IPR000315B-box-type zinc finger
CDDcd000214.53E-8347No hitNo description
SMARTSM003361.2E-9447IPR000315B-box-type zinc finger
SMARTSM003364.8E-175299IPR000315B-box-type zinc finger
PROSITE profilePS501199.7835299IPR000315B-box-type zinc finger
PfamPF006432.4E-75495IPR000315B-box-type zinc finger
CDDcd000213.09E-115699No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009641Biological Processshade avoidance
GO:0009658Biological Processchloroplast organization
GO:0009718Biological Processanthocyanin-containing compound biosynthetic process
GO:0010099Biological Processregulation of photomorphogenesis
GO:0015995Biological Processchlorophyll biosynthetic process
GO:0016607Cellular Componentnuclear speck
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MKIQCDACEN AVAAVMCCAD EAALCVDCDK RVHAANRLAN KHQRVPLLAQ PKEGSKCDIC  60
QEGAAFFFCL EDRALLCRDC DISIHTANDL ARKHTRFLLT GVRVGLENLG ADEQAEAPST  120
SAPSKVLGSP FPPKPTSPVA RVPVYQPAEQ KPSKKKSATA VPSSPVPEAF SGGGSGFSGG  180
FGGGSSGAGP SSRGGGASSS GLRRGQSVNV NELPDSTVPV WSVDEILGIP NLADGYSLND  240
IGSTKGMDAL MGDFDWTADL GMFDDLAFAE SMHEVPNFDY SPSPGLVPSN SPAVPRKGGG  300
SALKGKARSS YDMGPAVVPD SDDLFVVPDL GLQVPPSKKR RSNLDWH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0U9HR500.0A0A0U9HR50_KLENI; B-box zinc finger family protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP18041634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.17e-49light-regulated zinc finger protein 1
Publications ? help Back to Top
  1. Hori K, et al.
    Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation.
    Nat Commun, 2014. 5: p. 3978
    [PMID:24865297]