PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00032469-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | Dof | ||||||||
Protein Properties | Length: 289aa MW: 32469 Da PI: 4.7282 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 112.1 | 2.6e-35 | 24 | 80 | 6 | 61 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggr.rknkks 61 +cprC s+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGg + rkn+++ WALNUT_00032469-RA 24 PNCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGVCsRKNRRA 80 68*********************************************9863677665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 3.0E-29 | 6 | 79 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.8E-30 | 24 | 77 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 27.307 | 24 | 78 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 26 | 62 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence Send to blast |
MFTASRPPLA MADRRWKPNV EVAPNCPRCA SSNTKFCYYN NYSLSQPRYF CKGCRRYWTK 60 GGSLRNIPVG GVCSRKNRRA RSASLPQTQQ ACLTSFRNYN IANYEQSTDS CEYSNGDSKA 120 DIDLAVVFAR FLNQNPSTTD EPEFRTVPEL PNDSFNALSE SPCSLILGGG EQNSAVFDCH 180 RPNIGESDEI LVQGVDPQED KVHELIDEDD AANEFHLLQA LLDDEMVQEV LRSDAATSPS 240 LTWQRPVVHL QELEFSVQSN NHLSRMNLIS DSTWSCSDLS GFDVIFSRI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018808556.1 | 0.0 | PREDICTED: dof zinc finger protein DOF1.2-like | ||||
TrEMBL | A0A2I4DN27 | 0.0 | A0A2I4DN27_JUGRE; dof zinc finger protein DOF1.2-like |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1817 | 33 | 94 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21340.1 | 9e-42 | Dof family protein |