PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00027144-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 394aa    MW: 44052.1 Da    PI: 5.9895
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00027144-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM95.86.5e-30551971128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee...vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.... 77 
                         lp G++F+P+d el+ e+L++k+ + +      ++  e   +++e  +i++++P+++p  +k + ++++fF+++ ++ya+g+rk+r+    
  WALNUT_00027144-RA  55 LPLGVKFDPSDAELL-EHLAAKCGAGNskehlfID--EfipTLNEDqGICYTHPENFP-GAKRDGSSVHFFHRTMNAYASGHRKRRKihsq 141
                         699************.9999999888745554322..23222333337**********.556778899******************86777 PP

                 NAM  78 ....tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                             +++ +W++tgk+k+v++ +g ++g kk++v+y  +++ +k+ k +Wvmh+y+l
  WALNUT_00027144-RA 142 hgltMEHVRWHKTGKTKPVME-NGLQKGFKKIMVLYksSKKGSKPDKFNWVMHQYHL 197
                         777666899************.999***********4434666777*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-3440216IPR003441NAC domain
PROSITE profilePS5100529.13955216IPR003441NAC domain
PfamPF023652.0E-1256197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MARTWLINSR GLATKVRSAT CSPAHQIKDC GANRECPKCH YRIDNSDVST EWPGLPLGVK  60
FDPSDAELLE HLAAKCGAGN SKEHLFIDEF IPTLNEDQGI CYTHPENFPG AKRDGSSVHF  120
FHRTMNAYAS GHRKRRKIHS QHGLTMEHVR WHKTGKTKPV MENGLQKGFK KIMVLYKSSK  180
KGSKPDKFNW VMHQYHLGTE EEEKEGEFVV SKIFYQQPKQ SDNNDSGPVV EDSDTMTLQN  240
TPRTPKVNPP NPPRPGKSVL RDDVADSNLL LSSAQEAEYV SEAPLAPPPD SKTEDYMEYP  300
SWLAGESQAF DNSDLNCMDD LLLCKEVFDS CAPSGTNHTS YTDLFSNRIE ASGNNNVSPG  360
IADLANIELD TPPDFSLSDL QFGSQDSVLS WLYR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018840185.10.0PREDICTED: NAC domain-containing protein 8-like
TrEMBLA0A2I4G8H60.0A0A2I4G8H6_JUGRE; NAC domain-containing protein 8-like
STRINGEOY025310.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75723047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.16e-95NAC domain containing protein 44