PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00027070-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family BES1
Protein Properties Length: 719aa    MW: 80474 Da    PI: 5.7876
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00027070-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822142.73.3e-44732121133
              DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl.eeaeaagssas 87 
                         gg++r ++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++   +gs+p    a+++ ss s
  WALNUT_00027070-RA  73 GGTRRCRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPsrsQGSRPVgGGAAVVTSSPS 163
                         578999***************************************************************9878899999633333333333 PP

              DUF822  88 ..aspesslq.sslkssalaspvesysaspksssfpspssldsislasa 133
                           +s++s++   + ++s  +s ve  + ++k + +ps+s +d  s+a +
  WALNUT_00027070-RA 164 qmVSQHSPSAsVRGVASGYQSSVEYNAGRMKGVYIPSSSPYDLSSSARS 212
                         2366666666566788999***********************9877654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056878.6E-3975208IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514451.2E-173256688IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.806.1E-189258683IPR013781Glycoside hydrolase, catalytic domain
PfamPF013733.9E-101264675IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.7E-67295309IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.7E-67316334IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.7E-67338359IPR001554Glycoside hydrolase, family 14
PROSITE patternPS005060342350IPR018238Glycoside hydrolase, family 14, conserved site
PRINTSPR008427.3E-8412421IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007502.7E-67422444IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.7E-67495514IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.7E-67529545IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.7E-67546557IPR001554Glycoside hydrolase, family 14
PRINTSPR007502.7E-67564587IPR001554Glycoside hydrolase, family 14
PRINTSPR008427.3E-8567577IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007502.7E-67604626IPR001554Glycoside hydrolase, family 14
PRINTSPR008427.3E-8655669IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008427.3E-8670684IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 719 aa     Download sequence    Send to blast
MATDMQKLIG TSEEDDDEEM DMDVKEEDDD EENGDKHAAP VMVGVGGMVT GSSNNQFQHH  60
NQQTQDQVGT PGGGTRRCRP LEEKERTKLR ERHRRAITAR ILAGLRRHGN YNLRVRADIN  120
DVIAALAREA GWVVLPDGTT FPSRSQGSRP VGGGAAVVTS SPSQMVSQHS PSASVRGVAS  180
GYQSSVEYNA GRMKGVYIPS SSPYDLSSSA RSHTSSLVGD AGEPIENHPL IGGSINSIDD  240
KQIVDLPSKL LERNFAGTTH VPVYVMLPLG VINMKCELVD PDDLLKELRV LKSINIDGVV  300
VDCWWGIVEA HSPREYNWSG YKRLFQMVRE LKLKLQVVMS FHECGGNVGD DVCIPLPHWV  360
AEIGRSNPDI FFTDKEGRRN PECLSWGIDK ERVYFDYMRS FRVEFNEFFE DGIISIIEVG  420
LGPCGELRYP SFPVKHGWRY PGIGEFQCYD RYMLRSLKRA AEARGHSLWA RGPDNAGSYN  480
SRPHETGFFC DGGDYDGYYG RFFLKWYSQV LVDHGDRVLH LAKLAFEGTC IAAKLPSIHW  540
WYKTSSHAAE LTAGFYNSCN RDGYAAIAAM LKKRGAALNF TFPLVQMLDR HEDLLEALAD  600
PEGLVWQVLN AAWDVCIPVA SENALPCLDR VGYNKILDYG KPTNDLDGRH FLSFTYLRLS  660
PLLMEQQNFV EFEGFVKRMH DTVDAFSGPL ELDFICSFVR ADKMLVEVEL LKASLKNVT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1uko_A1e-14125971610478Beta-amylase
1uko_B1e-14125971610478Beta-amylase
1uko_C1e-14125971610478Beta-amylase
1uko_D1e-14125971610478Beta-amylase
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018859153.10.0PREDICTED: beta-amylase 7-like
RefseqXP_018859154.10.0PREDICTED: beta-amylase 7-like
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A2I4HSN00.0A0A2I4HSN0_JUGRE; Beta-amylase
STRINGVIT_15s0046g02640.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108833339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]