PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00026009-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 487aa    MW: 54410.1 Da    PI: 6.466
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00026009-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.83.9e-311442861128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...... 77 
                         lp G++F+P+d el+ e+L++k+   +      ++++  +++e  +i++++P++Lp  +k + ++++fF+++ ++ya+g+rk+r+      
  WALNUT_00026009-RA 144 LPLGVKFDPSDTELL-EHLAAKCGVGNskehlfIDEFIpTLEEEqGICYTHPENLP-GAKRDGSSVHFFHRTMNAYASGHRKRRKihsqhs 232
                         699************.999999877764555443332233555558**********.556778899******************8677777 PP

                 NAM  78 ..tksgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128
                            ++ +W++tgk+k+v++ +g ++g+kk++v+ykg  + +k+ k +Wvmh+y+l
  WALNUT_00026009-RA 233 lnKEHVRWHKTGKTKPVME-NGVQKGCKKIMVLYKGskKGSKPGKFNWVMHQYHL 286
                         7666899************.999***********8732445666*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-35129305IPR003441NAC domain
PROSITE profilePS5100529.067144305IPR003441NAC domain
PfamPF023652.1E-12145286IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    Send to blast
MSAPPKFDTF PDMFSRPQLL DILRQVPLFC AEAIASDPGS VNGWPCHCHA TLKKENHGSG  60
LCFRKDSQPE PLLCDVSVSS SNSKVIAYHS YRPWLINGRG LATKVRNATR SPAYQIKDCG  120
ANRECPKCHY CIDNSDVSPE WPGLPLGVKF DPSDTELLEH LAAKCGVGNS KEHLFIDEFI  180
PTLEEEQGIC YTHPENLPGA KRDGSSVHFF HRTMNAYASG HRKRRKIHSQ HSLNKEHVRW  240
HKTGKTKPVM ENGVQKGCKK IMVLYKGSKK GSKPGKFNWV MHQYHLGTEE EEKEGEYVVS  300
KILYQQPKQT DNNDGSPVVQ DSEIMTLQNS PRTPKANPPH PPRPGKSVLL DDFDHSNLLL  360
SPAQEAEYGS KASRAPAPDI QTKDKMEYPA WLAGESQAVE NSVLKCTDDS LLCKEVFDSR  420
AVDHSSMNHI SYTDFVSNID EDSGINNVSP GIADLENIEL DTPPDFQLGD LLFSSQDSIL  480
GWFDRLE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018809434.10.0PREDICTED: NAC domain-containing protein 8-like isoform X2
TrEMBLA0A2I4DQL10.0A0A2I4DQL1_JUGRE; NAC domain-containing protein 8-like isoform X2
STRINGEOY025310.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75723047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14490.14e-91NAC domain containing protein 85