PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00022987-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family G2-like
Protein Properties Length: 358aa    MW: 40378.4 Da    PI: 6.9912
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00022987-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like90.51.4e-28200254155
             G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         k r+rWt++LHe+Fv+ v+ LGG++kAtPk+il+lm+ + Lt+ hvkSHLQ YR+
  WALNUT_00022987-RA 200 KGRVRWTQDLHEKFVQSVNLLGGAQKATPKAILKLMDTNLLTILHVKSHLQNYRT 254
                         569***************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.718196257IPR017930Myb domain
SuperFamilySSF466893.05E-14198254IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.1E-25198255IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-21200255IPR006447Myb domain, plants
PfamPF002491.3E-7202253IPR001005SANT/Myb domain
PfamPF143795.9E-13285331IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MGYELNNTMD DDYFSQLFCT ESPLNLGICP PAMMGRSSEQ HKFEPAKLFG ITSTQPPESP  60
PSALHATESY MGFDQNEHRV GNSPASYSQF PASDLHIVLC KSSGYNFFTA ERAGSNFDFR  120
DTLQSLVKSQ LCIDQSNSSS EKSNKIPCNN MTKLSSHDEN MLLADQNITL VRRELPVPSD  180
SNQGLNVCHS SSYTPAPSKK GRVRWTQDLH EKFVQSVNLL GGAQKATPKA ILKLMDTNLL  240
TILHVKSHLQ NYRTAKYIPA SSQENSERKS SAKGIPEIPM QISSMQMKEA LQLQLEVERH  300
LHEQLELQQN LQSLIEEESR QLKMMFDQHQ KRYKRPFKTQ NSQVLSPNGQ HTSPEDAQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-20200257259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-20200257259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-20200257259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-20200257259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-20200257259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-20200257259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-20200257259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-20200257259Protein PHOSPHATE STARVATION RESPONSE 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018843611.10.0PREDICTED: protein PHR1-LIKE 1-like isoform X1
TrEMBLA0A2I4GIA00.0A0A2I4GIA0_JUGRE; protein PHR1-LIKE 1-like isoform X1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37403465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.11e-32G2-like family protein