PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00022747-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family Dof
Protein Properties Length: 309aa    MW: 34773.6 Da    PI: 8.6679
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00022747-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof114.73.9e-3644103261
              zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                         +++ lkcprCdstntkfCyynny+ sqPr+fC++C+r+WtkGG+lrnvPvGggr++nk+ 
  WALNUT_00022747-RA  44 QSEPLKCPRCDSTNTKFCYYNNYNQSQPRHFCRTCKRHWTKGGTLRNVPVGGGRKNNKRL 103
                         57889*************************************************999986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027016.9E-3247102IPR003851Zinc finger, Dof-type
PROSITE profilePS5088427.95948102IPR003851Zinc finger, Dof-type
ProDomPD0074788.0E-204893IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105086IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MGLSSKQVSG DGLDHWSQTL LEAQTLELPK PPPIRRQQQQ QQQQSEPLKC PRCDSTNTKF  60
CYYNNYNQSQ PRHFCRTCKR HWTKGGTLRN VPVGGGRKNN KRLKKSTNSA SASIDSSGSA  120
ATTTTKNSDV NNRLKTHMAF QAQQQMQINL PLSNIDGQKL IISDIFHQSL LRPPSFSPQN  180
NLISCSNLES NNFSGNNIYL DSTLRPPLDQ NQHFPFSSSS SFNTNPCSIS TSFQSSNVIH  240
NYTEELKTME EPTITNIMGK TSSTAIQPWQ KPTTSSGILD MSSYWNWDDI NTFASTDLNL  300
PWDDFEIKP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018810011.10.0PREDICTED: dof zinc finger protein DOF1.1-like isoform X2
TrEMBLA0A2I4DS930.0A0A2I4DS93_JUGRE; dof zinc finger protein DOF1.1-like isoform X2
STRINGcassava4.1_034118m1e-116(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51073356
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.18e-26DOF zinc finger protein 1