PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00022327-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family Dof
Protein Properties Length: 346aa    MW: 36897.9 Da    PI: 8.7166
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00022327-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.38.1e-393291362
              zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                        e+  kcprCds ntkfCyynnysl+qPr+fCk+CrryWt+GGalrnvP+Ggg+rknkk++
  WALNUT_00022327-RA 32 EQGPKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTNGGALRNVPIGGGCRKNKKVK 91
                        67789****************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074787.0E-263089IPR003851Zinc finger, Dof-type
PfamPF027013.2E-323489IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.9663589IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103773IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010052Biological Processguard cell differentiation
GO:0010118Biological Processstomatal movement
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1902066Biological Processregulation of cell wall pectin metabolic process
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MSPDNIPAKP VIQKDDSQGS GSRKTASTRP AEQGPKCPRC DSPNTKFCYY NNYSLTQPRH  60
FCKTCRRYWT NGGALRNVPI GGGCRKNKKV KSSSRLSGDS KDTVISSSEI GGLKFFHGLS  120
PAMDFQLGGL SYPRLHPPTT GIYNQFSSLG DVSSTFAAAS GGVTGPCFTL DPSGSSNSLM  180
TFNYPLSSTS AGVGGFSTAA VQNTTSINIH SGLASSIESL STINQDLHWK LQQQRLAMLF  240
GGEIQKDNSV VPSIPLETHT QKPQPIVFQN LEISKTEACG VGNSRKEGTS GDQIATEWFF  300
GNSYGPVTTT TTPTNSAVND GGNGNASSWN GTQAWSHDLQ QYSALP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018811330.10.0PREDICTED: dof zinc finger protein DOF5.7-like
TrEMBLA0A2I4DW120.0A0A2I4DW12_JUGRE; dof zinc finger protein DOF5.7-like
STRINGEOX918921e-162(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38543460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65590.17e-66Dof family protein