PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00021412-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 557aa    MW: 61549.3 Da    PI: 6.8418
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00021412-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.34.4e-10272312545
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                         k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  WALNUT_00021412-RA 272 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 312
                         788*************************9777777666554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.6E-7261315No hitNo description
SMARTSM003382.7E-9268331IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415270314IPR004827Basic-leucine zipper domain
CDDcd147081.07E-23272324No hitNo description
SuperFamilySSF579599.38E-7272315No hitNo description
PfamPF001703.5E-7272312IPR004827Basic-leucine zipper domain
PROSITE patternPS000360275290IPR004827Basic-leucine zipper domain
PfamPF141445.9E-30354429IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 557 aa     Download sequence    Send to blast
MGDACFVLFI SELSCLWGFS GLIFIHNFLV LGLSYSSSSG LGNEGLVIFC QNKQSRPTWF  60
LAPDRKLLKS SATLLSLTLS QSVASPCFVA CNCRRTKVLR CDDCDGDFMG SRTVEIGAED  120
GNNVMTGMLS LVPAIPNSNS LGTEGNTIRS SRISDLGTFE QSLGFRIEDA ADLIPVYYQM  180
KSNSQALGTD NQFATLNKTL QLQTEPQANL VSTFGGHREN WGESTMAEAS PRTDTSTDDT  240
DDKNHGHERG QLTAVVVSDS SDKSKEKSGD QKTLRRLAQN REAARKSRLR KKAYVQQLES  300
SRLKLTQLEQ ELQRARQQGI FISSSGDQSH SMSGNGALAF DIEYARWLEE HNKQINELRA  360
AVNSHAADAE LRTIVDNVTA HFDDIFRLKG IAAKVDVFHI LSGMWQTTAE RCFMWIGGFR  420
SSELLKLLVN QLEPLTEQQL VGIYNLQQSS QQAEDALSQG MEALQQSLAE TLANGSPNPS  480
GSSGNVANYM GQMAMAMGKL GTLEGFLRQA DNLRQQTLQQ MHRILTTRQS ARALLAKNDY  540
FSRLRALSSL WLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018850936.10.0PREDICTED: transcription factor TGA2.3-like isoform X1
RefseqXP_018850937.10.0PREDICTED: transcription factor TGA2.3-like isoform X1
RefseqXP_018850938.10.0PREDICTED: transcription factor TGA2.3-like isoform X1
RefseqXP_018850939.10.0PREDICTED: transcription factor TGA2.3-like isoform X1
RefseqXP_018850940.10.0PREDICTED: transcription factor TGA2.3-like isoform X1
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A2I4H4720.0A0A2I4H472_JUGRE; transcription factor TGA2.3-like isoform X1
STRINGEOY086450.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-129bZIP family protein