PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00021118-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family Dof
Protein Properties Length: 288aa    MW: 31705.3 Da    PI: 7.6057
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00021118-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof127.73.5e-402687263
              zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                        +e+alkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+r+nk+sss
  WALNUT_00021118-RA 26 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSS 87
                        7899******************************************************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-292484IPR003851Zinc finger, Dof-type
PfamPF027018.3E-342884IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.6373084IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103268IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005730Cellular Componentnucleolus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    Send to blast
MPDHMLENMM VCLKGQPDSR KPRPQPEQAL KCPRCDSTNT KFCYYNNYSL SQPRYFCKSC  60
RRYWTKGGTL RNVPVGGGCR RNKRSSSSSS SASSSSSKRT QDQQPAMTPN MTNPSLGAGF  120
PSLSYDSPND LSLAFARLQK QSCGQLGFDD EQDFPMGNAA GFLGSLRNGF LDNQSVFPNM  180
YYNGYDNNGS LGEADINGGE GVGIIREMAA LQPYEELGNY AATTAVTVTT MKQELCSSGR  240
ENENRVWWGF PWQLNANGMS IDALDSGRES WNGIAPSSWH GLINSPLL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018817445.10.0PREDICTED: dof zinc finger protein DOF2.1-like
TrEMBLA0A2I4EDH80.0A0A2I4EDH8_JUGRE; dof zinc finger protein DOF2.1-like
STRINGGLYMA12G07710.11e-100(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50263051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.13e-49TARGET OF MONOPTEROS 6