PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

WALNUT_00020043-RA

Organism

Juglans regia

Taxonomic ID

51240

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans

Family

EIL

Protein Properties

Length: 447aa MW: 50385.7 Da PI: 4.6715

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
WALNUT_00020043-RA	genome	JHU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	179.9	2.4e-55	40	150	1	114
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsL 91 eel++rmwkd+++lkr+ker+k + +++a++++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++ WALNUT_00020043-RA 40 EELERRMWKDRIRLKRIKERQKL-V--AQQAADKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNI 127 8****************9996.3..34459******************************************************* PP XXXXXXXXXXXXXXXXXXXXXXX CS EIN3 92 raWWkekvefdrngpaaiskyqa 114 raWWkekv+fd+ngpaai++++ WALNUT_00020043-RA 128 RAWWKEKVKFDKNGPAAIANSDN 150 ******************954 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04873	8.9E-54	40	155	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence Send to blast
MDHLMMVDDP LGDSSDLEVD DIRCENIAEK DVSDEEIEAE ELERRMWKDR IRLKRIKERQ 60 KLVAQQAADK QKPKQTSDQA RRKKMSRAQD GILKYMLKLM EVCKARGFVY GIIPEKGKPV 120 SGASDNIRAW WKEKVKFDKN GPAAIANSDN GASSVTDMPR RGRGENKQAA ISSESDYDVD 180 GVDDGVGSVS SKDDRRNQPA DVETSENLRN STPPVQDKDP GEKQPRRKRA RVRSNPSDQL 240 PATTHNEHLH AEPRITVPDV NDANGQLVEF QIHGGREENG TVSALRPLEK DTGDQLQLPA 300 SECNRFSDLP SDNVISTQSM YVDGRPLLHP VVQNTEMHHD DASNFYNDWQ QSQIVMNEPQ 360 IRPEEVGVIP MLDRSANEIP GGDLRYYVKD TFTNEQHRPV DSQYGSGIDS LPLDFGELNS 420 PFHLGFDSLS QFDDFLPDED LIQYFGA

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence Send to blast

MDHLMMVDDP LGDSSDLEVD DIRCENIAEK DVSDEEIEAE ELERRMWKDR IRLKRIKERQ  60
KLVAQQAADK QKPKQTSDQA RRKKMSRAQD GILKYMLKLM EVCKARGFVY GIIPEKGKPV  120
SGASDNIRAW WKEKVKFDKN GPAAIANSDN GASSVTDMPR RGRGENKQAA ISSESDYDVD  180
GVDDGVGSVS SKDDRRNQPA DVETSENLRN STPPVQDKDP GEKQPRRKRA RVRSNPSDQL  240
PATTHNEHLH AEPRITVPDV NDANGQLVEF QIHGGREENG TVSALRPLEK DTGDQLQLPA  300
SECNRFSDLP SDNVISTQSM YVDGRPLLHP VVQNTEMHHD DASNFYNDWQ QSQIVMNEPQ  360
IRPEEVGVIP MLDRSANEIP GGDLRYYVKD TFTNEQHRPV DSQYGSGIDS LPLDFGELNS  420
PFHLGFDSLS QFDDFLPDED LIQYFGA

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269\|PubMed:9215635, ECO:0000269\|PubMed:9851977}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018835243.1	0.0	PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
Swissprot	O23116	2e-64	EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBL	A0A2I4FUC0	0.0	A0A2I4FUC0_JUGRE; ETHYLENE INSENSITIVE 3-like 3 protein
STRING	XP_008243598.1	1e-106	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF18205	5	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73730.1	4e-56	ETHYLENE-INSENSITIVE3-like 3

Publications ? help Back to Top
Frerigmann H,Gigolashvili T Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency. Front Plant Sci, 2014. 5: p. 626 [PMID:25426131] Zheng ZL,Zhang B,Leustek T Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing. Front Plant Sci, 2014. 5: p. 710 [PMID:25566284] Panda SK,Sunkar R Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling. Plant Signal Behav, 2015. 10(4): p. e1010916 [PMID:25912823] Wawrzyńska A,Sirko A EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor. Plant Sci., 2016. 253: p. 50-57 [PMID:27968996]