PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

WALNUT_00019683-RA

Organism

Juglans regia

Taxonomic ID

51240

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans

Family

BES1

Protein Properties

Length: 330aa MW: 35464.5 Da PI: 7.4406

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
WALNUT_00019683-RA	genome	JHU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	208.3	2.1e-64	3	142	2	147
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92 ++ r ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkALc+eAGw+ve DGttyrkg+kp +++++++ sa sp+s WALNUT_00019683-RA 3 SGSRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVETDGTTYRKGCKPVDRMDVIVGSAASSPCS 93 789************************************************************************************** PP DUF822 93 slqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvs 147 s+q +sp++sy++sp sssfpsp+s++ + + +a +sl+p+l++ls++s WALNUT_00019683-RA 94 SYQ--------PSPRASYNPSPGSSSFPSPASSSYAANPNAdgSSLIPWLKNLSSAS 142 ........**************998766554444444*******99844 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.0E-64	4	139	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence Send to blast
MTSGSRLPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVETDGTTY RKGCKPVDRM DVIVGSAASS PCSSYQPSPR ASYNPSPGSS SFPSPASSSY 120 AANPNADGSS LIPWLKNLSS ASPSASASKF PHLYIHSGSI SAPVTPPLSS PPACTPRFRT 180 DWDDQSARPG WVGQHYSFLP SSTPPSPGRE IVPDPEWFAG IQIPQVGPTS PTFSLVSSNP 240 FGFKEEALAG GGSRMWTPGQ SGTCSPAMAA GYDHTADIPM SEAVSDEFAF GSHTTGLVKP 300 WEGERIHEEC GDDLELTLGS SKTRCVAVDM

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	5e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	5e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	5e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	5e-23	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018813166.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4-like isoform X1
Swissprot	Q9ZV88	1e-135	BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBL	A0A2I4E194	0.0	A0A2I4E194_JUGRE; BES1/BZR1 homolog protein 4-like isoform X1
STRING	EOY13391	1e-172	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2661	33	75

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-120	BES1/BZR1 homolog 4