PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00019245-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 335aa    MW: 37649.5 Da    PI: 4.3021
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00019245-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM91.31.6e-28121365127
                 NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.........kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                         +rF+P+de ++ ++L+ k++g++ e+ ++i e++ + +ePwdL++          +k +  ew+ F ++d+   +gkr++r+t++g+Wk t
  WALNUT_00019245-RA  12 MRFSPSDEKVM-DFLRSKITGNDREV-DFIYEAQNCGWEPWDLRNlclfwwyicGIKLDYPEWWLFLPQDR---NGKRSKRSTNAGFWKVT 97 
                         8********99.9**********999.99**************966899998876666778*******999...689************** PP

                 NAM  87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                         g+ k+++s ++ l+g k+ Lvfy+g++p  + t+Wvmhey 
  WALNUT_00019245-RA  98 GQPKKIMS-DSGLIGKKNFLVFYTGTRPG-NITHWVMHEYC 136
                         ********.999***********988775.8*********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100527.5728161IPR003441NAC domain
SuperFamilySSF1019414.84E-2912144IPR003441NAC domain
PfamPF023652.1E-1412136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MGELPPNLKQ WMRFSPSDEK VMDFLRSKIT GNDREVDFIY EAQNCGWEPW DLRNLCLFWW  60
YICGIKLDYP EWWLFLPQDR NGKRSKRSTN AGFWKVTGQP KKIMSDSGLI GKKNFLVFYT  120
GTRPGNITHW VMHEYCTTLK ELDGTLPGQV SFWFLKKSVT DPKFNFAGTA VSSPTTAFEV  180
QAEATTTPQI FNETISTTTP VDCGDICFWA HAAENQLGED AATEEDLNLE MISELLQNPV  240
DFEILTPSST SLLNRSTAAK SFEECFFESE IASALASPEI FPKLNFDCTT SNAMPLGCTV  300
KEIEILEDVE HPVIGVNGSD LKLENGEDVA GLDGV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-18413517140NO APICAL MERISTEM PROTEIN
1ut4_B1e-18413517140NO APICAL MERISTEM PROTEIN
1ut7_A1e-18413517140NO APICAL MERISTEM PROTEIN
1ut7_B1e-18413517140NO APICAL MERISTEM PROTEIN
3swm_A1e-18413520143NAC domain-containing protein 19
3swm_B1e-18413520143NAC domain-containing protein 19
3swm_C1e-18413520143NAC domain-containing protein 19
3swm_D1e-18413520143NAC domain-containing protein 19
3swp_A1e-18413520143NAC domain-containing protein 19
3swp_B1e-18413520143NAC domain-containing protein 19
3swp_C1e-18413520143NAC domain-containing protein 19
3swp_D1e-18413520143NAC domain-containing protein 19
4dul_A1e-18413517140NAC domain-containing protein 19
4dul_B1e-18413517140NAC domain-containing protein 19
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018840877.10.0PREDICTED: protein NTM1-like 9 isoform X1
TrEMBLA0A2I4GAF00.0A0A2I4GAF0_JUGRE; protein NTM1-like 9 isoform X1
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.36e-38NAC transcription factor-like 9