PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00019140-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | NAC | ||||||||
Protein Properties | Length: 290aa MW: 33264.7 Da PI: 7.5407 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 163.8 | 6.3e-51 | 7 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhPtd+elv++yL++k+++ +l + +i+e+d+yk++Pw+Lp+ + +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk+ WALNUT_00019140-RA 7 LPPGFRFHPTDQELVNHYLCRKCASLPLAV-PIIREIDLYKFDPWQLPELALYGEKEWYFFSPRDRKYPNGSRPNRAAGNGYWKATGADKP 96 79*************************999.88***************7656689************************************ PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + + g+kk Lvfy g+apkg kt+W+mheyrl WALNUT_00019140-RA 97 IGK--PKPLGIKKALVFYAGKAPKGIKTNWIMHEYRL 131 *98..789***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.59E-62 | 4 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.819 | 7 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.0E-27 | 8 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence Send to blast |
MTSELQLPPG FRFHPTDQEL VNHYLCRKCA SLPLAVPIIR EIDLYKFDPW QLPELALYGE 60 KEWYFFSPRD RKYPNGSRPN RAAGNGYWKA TGADKPIGKP KPLGIKKALV FYAGKAPKGI 120 KTNWIMHEYR LANVDRSAGK KNNSRLDDWV LCRIYNKRGT VEKNHTTTEQ KMASFPEVEE 180 QKPKIMVPAG QNIAPSPMIG NYQLYTETTS DSAPRLHTES SSSEQVVLSP DVTWEKEVQS 240 EMDSGFNYFD NLQFNFTDGF AEDPFASQVQ YQMDQLTPLL DMSMYLQKPF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-81 | 3 | 163 | 11 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018810556.1 | 0.0 | PREDICTED: NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-117 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A2I4DTT4 | 0.0 | A0A2I4DTT4_JUGRE; NAC domain-containing protein 2-like | ||||
STRING | EOX92686 | 1e-150 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1258 | 34 | 108 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-109 | NAC family protein |