PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00017963-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family G2-like
Protein Properties Length: 395aa    MW: 44710.8 Da    PI: 9.2397
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00017963-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like971.4e-30103156255
             G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         prlrWtp LH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+
  WALNUT_00017963-RA 103 PRLRWTPGLHFSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 156
                         8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.83299159IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-2899157IPR009057Homeodomain-like
SuperFamilySSF466892.51E-13101157IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-21103158IPR006447Myb domain, plants
PfamPF002495.3E-7104155IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MMEGLEIYDD VKSTDRSTEE QAENASAVSS QRCSSFDLNE EACSEVGDSM AEVAELSIDE  60
DNDQIKRRDR NSANYNDPSG SGAGSGNERI KTKVRQYVRS KMPRLRWTPG LHFSFVHAVE  120
RLGGQERATP KLVLQLMNVR GLSIAHVKSH LQMYRSKKLD EAGQDGNNVA HDLLQSPLSR  180
PSLDIKASFA RQQQWTTNQH DIRRESYLIR KDLGRDKGLS SSAAFQTQAG WSTAPNQIHK  240
VLDTNIGIGP MRPSQFLEEK RWPPFETIST SQWKLKRSTP TNTAYTRDNA ITKFVGETYM  300
STRPTEKWNR PAGNLTKDRQ FPSSSSDDLV RNSNGFKPEF EPPFRLGLNR EKMSMDKEWL  360
PDLQLRLSQR VGNEDEIKST RGTATHEIST KLSLS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A4e-17104158357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-17104158357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-17104158357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-17104158357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018847964.10.0PREDICTED: uncharacterized protein LOC109011289
RefseqXP_018847965.10.0PREDICTED: uncharacterized protein LOC109011289
RefseqXP_018847966.10.0PREDICTED: uncharacterized protein LOC109011289
RefseqXP_018847967.10.0PREDICTED: uncharacterized protein LOC109011289
RefseqXP_018847968.10.0PREDICTED: uncharacterized protein LOC109011289
TrEMBLA0A2I4GVP00.0A0A2I4GVP0_JUGRE; uncharacterized protein LOC109011289
STRINGEOY279835e-97(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30123270
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.14e-37G2-like family protein