PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00016606-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 411aa    MW: 45745 Da    PI: 6.7368
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00016606-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.1e-1854102355
                 AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  WALNUT_00016606-RA  54 YRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDLAARAMRG 102
                         9*******.**********93....35999**********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003804.4E-3353116IPR001471AP2/ERF domain
PROSITE profilePS5103222.16853110IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-2953109IPR001471AP2/ERF domain
CDDcd000184.45E-3054109No hitNo description
PRINTSPR003672.4E-95465IPR001471AP2/ERF domain
PfamPF008471.7E-1154102IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-2154110IPR016177DNA-binding domain
PRINTSPR003672.4E-97692IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MEDDFRRLNR LTHSLEPISD LHKRCTTTAT EAATTTTTTN KRSLKDQPGG TMSYRGVRRR  60
PWGRYAAEIR DPQSKERRWL GTFDTAEEAA CAYDLAARAM RGLKARTNFV YPAPPPPSAT  120
DTFLPPFNFP RQSQRPVKIP ANRHQFGAAS GWSAFSNHRD GDHFPGSAAQ KNSSLNMLLL  180
RDLLSSSSNP SLVSPTQPQG LDHEQLPCIN ISSSSASAFS DCSLLNQSSN LNISQTFVSS  240
SMSLPPIDNN LINYNSGVSN RTTAQQIHDF EFIPKESSDS GLLEEIIHGF FPKPSTKKCE  300
SPKTQTCTFD SRPPQISDIS IPQSLDEMKR WEKNEHLGFS FDYQEVPHQL ENLSGVRSEL  360
FGMTQAAAVP FSYEMPAVNL HQVGGPESML MDDFFQYQEP LSAFAARVQN A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-19541091571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018823164.10.0PREDICTED: ethylene-responsive transcription factor ESR2-like
TrEMBLA0A2I4EUT30.0A0A2I4EUT3_JUGRE; ethylene-responsive transcription factor ESR2-like
STRINGEOY006421e-105(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41003256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.15e-25DORNROSCHEN-like