PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00015337-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 279aa    MW: 30709.5 Da    PI: 4.7246
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00015337-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643e-20119169255
                 AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                         +y+GVr+++ +g+++AeIrd      k +r++lg+f+taeeAa a+++a+++++g
  WALNUT_00015337-RA 119 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFDTAEEAALAYDKAALRIRG 169
                         7********.**********3...2234*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.5E-32118178IPR001471AP2/ERF domain
SMARTSM003805.8E-38119183IPR001471AP2/ERF domain
CDDcd000181.52E-30119177No hitNo description
SuperFamilySSF541719.15E-24119179IPR016177DNA-binding domain
PROSITE profilePS5103224.092119177IPR001471AP2/ERF domain
PfamPF008474.0E-15119169IPR001471AP2/ERF domain
PRINTSPR003672.6E-11120131IPR001471AP2/ERF domain
PRINTSPR003672.6E-11143159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MSKNCEDPPA PGAILENVWA SFISGDGPGT TYTPELSRPW EELPSLDRRD GSKEILRRLP  60
SLGRWISMGA EAWEALLDGI VVPASNMEQS CNDNLECNGA TGLCLQKPNA KAEKAATRHY  120
RGVRRRPWGK YAAEIRDSSR KGARVWLGTF DTAEEAALAY DKAALRIRGP KAYLNFPLET  180
VAEALGLDYS GNDVSCSSMS NKGLGEDPAC TFLGCSAEKV CNPRKRSASR EFEQDIDMII  240
EQPALKKTRS MENILGNEFD VVEFQDLGTD YLDSLLSSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-28115180166ATERF1
3gcc_A8e-28115180166ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018838470.10.0PREDICTED: ethylene-responsive transcription factor ERF091-like
TrEMBLA0A2I4G3M80.0A0A2I4G3M8_JUGRE; ethylene-responsive transcription factor ERF091-like
STRINGEOY281131e-111(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF95473142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.12e-42ERF family protein