PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00014993-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 518aa    MW: 59574.4 Da    PI: 6.7122
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00014993-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1515.8e-4751323128
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                         +GfrFhPtdeelv++yL+ k  gk+ e+ ++i+evdi+k+eP dLpk   +k++++ew+fF++r+ ky++++r+nratksgyWkatg+d++
  WALNUT_00014993-RA   5 VGFRFHPTDEELVDHYLRLKRLGKDSEV-RAIAEVDICKWEPYDLPKlsVIKSDDQEWFFFCRRELKYSSSHRTNRATKSGYWKATGNDRK 94 
                         7************************999.89***************5458889999*********************************** PP

                 NAM  92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +++k +++++g kktLvf+ gr p+g+ tdWv+hey+ 
  WALNUT_00014993-RA  95 IKAKrTNKVIGKKKTLVFHIGRVPNGVGTDWVIHEYHS 132
                         **9967778***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100550.6363150IPR003441NAC domain
SuperFamilySSF1019415.1E-535150IPR003441NAC domain
PfamPF023655.8E-255131IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MESIVGFRFH PTDEELVDHY LRLKRLGKDS EVRAIAEVDI CKWEPYDLPK LSVIKSDDQE  60
WFFFCRRELK YSSSHRTNRA TKSGYWKATG NDRKIKAKRT NKVIGKKKTL VFHIGRVPNG  120
VGTDWVIHEY HSTSTHPHQK DFVLCRLMKK HDEKTDVSTC DEVEASSYPA SDFESRAPND  180
SIFEVHFESQ APNDSIFELE ADLEPFFQPT FQQEVFDFEE FTVSNTQGSP FIDPLSPNSR  240
NNELNWMQFQ SDRDEQEEDT EFLNSLIVDQ DENSQEEIRH FRDIREPESL QKVYLYAGGP  300
SSDTDTDNAQ SPCDRLMGTS SLFNEHVSPQ EVRHQALKLQ SGTVSSSSAN HDQYRSRGSS  360
FHHDDLMNIL RPSINCLSRV RPKSPAKVRT STPQHQHRLR QSAGQRVAHR RVQLQYNNSH  420
RIAKDASRDS ITTSLPQKET SIMDSDKEQK MAQCTNTKKS LKSTTLDSAG SDRKGYFIFV  480
EASQQSHVSS PPLVYLAKLL FGLFLFLVFI REVVVYGM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-38615318171Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018834271.10.0PREDICTED: NAC domain-containing protein 62-like isoform X1
TrEMBLA0A2I4FRJ10.0A0A2I4FRJ1_JUGRE; NAC domain-containing protein 62-like isoform X1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.23e-66NAC 014