PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00010061-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family ERF
Protein Properties Length: 336aa    MW: 37477.9 Da    PI: 5.1232
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00010061-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.38.9e-19119169155
                 AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                         s+y+GVr++k +g+W+AeIrd +     + +r++lg++ t+eeA +a+ + r+++e 
  WALNUT_00010061-RA 119 SKYRGVRQRK-WGKWAAEIRDpF-----KgARIWLGTYNTPEEASEAYQRKRLEFEA 169
                         89*******9.**********55.....45**********************99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.05E-23119167No hitNo description
PfamPF008474.9E-12119169IPR001471AP2/ERF domain
SuperFamilySSF541712.88E-17119167IPR016177DNA-binding domain
PROSITE profilePS5103219.401120183IPR001471AP2/ERF domain
SMARTSM003802.0E-17120184IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-21120168IPR001471AP2/ERF domain
PRINTSPR003679.9E-10121132IPR001471AP2/ERF domain
PRINTSPR003679.9E-10143159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MSEPKKRLAN QNFCKKSRKA KLPVEMMRRV RIICSDPYAT DSSSSEDESE RCEKRAKKPK  60
RLVREVHLPL VKSTPPKLLQ SESSCQDSNN GSRTPKVSEA EKKMVLAKTA KARKRPSSSK  120
YRGVRQRKWG KWAAEIRDPF KGARIWLGTY NTPEEASEAY QRKRLEFEAA MTANAASKKS  180
NNDAASSSSA VASQSQKTHI LGSSEDSESV LSHTSPALVP PLETSASNTN GNIVTDSFKE  240
EGIDTNAEID LVGLLQIPDD LGLTGELFDP IPFGEEIDAG REFDSLWFDY DREEIFKDFD  300
VCGTEDGGPN ELPDWDFADV CDDFAWMNEP LNIPCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-111191601355Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018825343.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
RefseqXP_018825344.10.0PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A2I4F1230.0A0A2I4F123_JUGRE; ethylene-responsive transcription factor ERF118-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.21e-31ERF family protein