PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00009034-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family Dof
Protein Properties Length: 252aa    MW: 27611.1 Da    PI: 10.011
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00009034-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof112.81.6e-352382261
              zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                        ++++l+c rC+stntkfCyynnysl+qPry+Ck+C+ryWt+GG++rnvPvGg +rknkks
  WALNUT_00009034-RA 23 PQAHLNCRRCNSTNTKFCYYNNYSLTQPRYLCKTCKRYWTEGGSIRNVPVGGCSRKNKKS 82
                        57789*****************************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074785.0E-212374IPR003851Zinc finger, Dof-type
PfamPF027012.6E-302581IPR003851Zinc finger, Dof-type
PROSITE profilePS5088426.7852781IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102965IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MEGIMINTRT SLLSAEKRAI RSPQAHLNCR RCNSTNTKFC YYNNYSLTQP RYLCKTCKRY  60
WTEGGSIRNV PVGGCSRKNK KSAAASRSTS SKTPDFNPVL SLPQFSSQNL KAKEAQVLNL  120
AFPTIDKKYH GWSQGNSSSS ASSAPLSAFE LLRTGIASRG LNTYIPSPML DTSALYYSSA  180
GFHLQELKTT PGFSVDGLGS TGYEIQENSA KLLFPFGESK QISSTNEVEP RKGQAGISTG  240
NWSHAMLNGG YW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018846786.10.0PREDICTED: dof zinc finger protein DOF2.5-like
TrEMBLA0A2I4GSB20.0A0A2I4GSB2_JUGRE; dof zinc finger protein DOF2.5-like
STRINGEOX956553e-82(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67434137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.33e-47Dof family protein