PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00008463-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family Dof
Protein Properties Length: 345aa    MW: 36191.2 Da    PI: 8.3612
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00008463-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.53e-3873132362
              zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                         ++alkcprC+stntkfCy+nnysl+qPr++Ck+CrryWt+GGalrnvPvGgg+r+nk+s+
  WALNUT_00008463-RA  73 DTALKCPRCESTNTKFCYFNNYSLTQPRHLCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 132
                         7789*****************************************************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-3060121IPR003851Zinc finger, Dof-type
PfamPF027012.7E-3274130IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.09676130IPR003851Zinc finger, Dof-type
PROSITE patternPS01361078114IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MVFSSIPAYL DPANWQQQQN HDPFGTSTTS SSQLLPPPQP LSPPPIPHGG GPGSIRPGSM  60
ADRARQANIP LPDTALKCPR CESTNTKFCY FNNYSLTQPR HLCKTCRRYW TRGGALRNVP  120
VGGGCRRNKR SKGSSSKSPA SSTDRQSASA GSTSSIPSNG GPTADIIGIS PQIPQLHYMT  180
PLHQLPDFAA GEIPLNYGLN YGTISAPMGL AGDLNFQIGS AGTAGDGGSL LSAGAYEQWR  240
LQQAQQFPFL GGLDPSLGLF GSSVEASSYV GGGVSQAPAA KASSLGVSTH DQVAEASVKM  300
EESQELNLSR QFLGMPGNDP FWGGSATAWT DLSGFSSSST TRNPL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018841679.10.0PREDICTED: dof zinc finger protein DOF5.1-like
TrEMBLA0A2I4GCN80.0A0A2I4GCN8_JUGRE; dof zinc finger protein DOF5.1-like
STRINGEOY075471e-118(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65634143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.12e-40DNA binding with one finger 2.4