PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00007869-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family CAMTA
Protein Properties Length: 944aa    MW: 105579 Da    PI: 6.9492
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00007869-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-156.17.3e-1875174118
                CG-1  74 KvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118
                           ++v+vl+cyYah+e+n++fqrr+yw+L+ +le+ivlvhy+evk
  WALNUT_00007869-RA   7 MANSVDVLHCYYAHGEDNENFQRRSYWMLDVHLEHIVLVHYREVK 51 
                         5789**************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010766.0E-4151IPR005559CG-1 DNA-binding domain
PROSITE profilePS5143732.718156IPR005559CG-1 DNA-binding domain
PfamPF038596.7E-14649IPR005559CG-1 DNA-binding domain
CDDcd001021.02E-6374470No hitNo description
SuperFamilySSF812968.05E-16375469IPR014756Immunoglobulin E-set
PfamPF018339.4E-6389468IPR002909IPT domain
Gene3DG3DSA:2.60.40.102.4E-6390473IPR013783Immunoglobulin-like fold
SuperFamilySSF484034.84E-15560681IPR020683Ankyrin repeat-containing domain
CDDcd002042.76E-12566678No hitNo description
Gene3DG3DSA:1.25.40.201.0E-14566681IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.724586680IPR020683Ankyrin repeat-containing domain
SMARTSM002480.074619648IPR002110Ankyrin repeat
PROSITE profilePS500889.511619651IPR002110Ankyrin repeat
SMARTSM00248350658687IPR002110Ankyrin repeat
SuperFamilySSF525401.86E-9765844IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.036792814IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.407793822IPR000048IQ motif, EF-hand binding site
PfamPF006120.0048794813IPR000048IQ motif, EF-hand binding site
SMARTSM000156.1E-4815837IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.963816844IPR000048IQ motif, EF-hand binding site
PfamPF006129.4E-5818837IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 944 aa     Download sequence    Send to blast
MELCVLMANS VDVLHCYYAH GEDNENFQRR SYWMLDVHLE HIVLVHYREV KEGYKSGISR  60
LVVDPGSQAG SSQSSPVSCF AQENSPAPTI QTSYASSLNR VDRNGLMFSS EFENVDSGND  120
PRSSSLTRPI FGSILHNTSL LEHKVTGFPE LSMNPPGLWL AGPKYCETSG LSNWAEVNSL  180
SNADGSSDQK FFIEHRSEAD FITDKLTDAR LDADSIVQDG VTRGDINDKG NQTYMAASLE  240
VVQVNVSYYR SFPSEIRALL QVPEESGFNL PHPRFHSNSD PHVEVTSTVH AEEKGGDGVN  300
NEAGELKKLD SFGRWMDKEI GRDCDNSLMA SDSGNYWNTL DDENDKKEVS SLSRHMQLDA  360
DLLGPHLCQE QLFTIHEFSP DWAYSEDTTE FSPKDSTKVL IVGTFLVRKE LSSKIKWGCM  420
FGEIEVSAEV LTDTVIRCQT PPHAPGRVPF YVTRSNRLAC SEVREFEYRE KPSGTVFPLA  480
VKCAPEDEVC FQMRLVKLLN LGRVRNRFDC SIQDCDKCKL KSTIYSMRSE SGNDMGRVEE  540
ISLTFNSNRM NPREELIQCL LKDRLHEWLI CKIHEEGKGP HVLDGEGQGV VHLAAALGYE  600
WAMGPIVAAG VSPNFRDVRG RTGLHWASYF GREETVIALL RLGAAPGVVE DPTPASPGGK  660
TAADLASSRG HKGIAGYLAE ADLICHLSTL TVNENVMDCV AARIAAEKAI ENATQVVPSD  720
VAINESLSLK GSLAAVRKSA HAAALIQAAF RARSFNHRQL NKKSNDISEV ALDLVTLGSL  780
NKVRKRGHFK EYLHSAAAKI QQRYRGWKGR KEFLKIRSRI VKIQAHVRGH QARKQYRKII  840
WSVSVVEKAI LRWRRKRTGL RGFRVEEVMG DVASETQKTD EYEFLRISRK QKFAGVENAL  900
ARVRNNDEII DHFNLNRNLH NIWLVPASGH NENRFLILVI SVIG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018833865.10.0PREDICTED: calmodulin-binding transcription activator 3-like isoform X3
TrEMBLA0A2I4FQD40.0A0A2I4FQD4_JUGRE; calmodulin-binding transcription activator 3-like isoform X3
STRINGVIT_05s0020g00630.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF128892526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-143Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains