PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00007710-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family G2-like
Protein Properties Length: 236aa    MW: 26640.9 Da    PI: 5.3492
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00007710-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.22.8e-311165155
             G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                        k+rlrWt+eLH++Fv+av+qLGG+++AtPk il++m+++ L ++hvkSHLQkYR+
  WALNUT_00007710-RA 11 KERLRWTQELHDQFVQAVNQLGGPDRATPKGILKTMGIPELNIYHVKSHLQKYRI 65
                        68****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.052868IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.0E-29966IPR009057Homeodomain-like
SuperFamilySSF466893.23E-171065IPR009057Homeodomain-like
TIGRFAMsTIGR015576.5E-241166IPR006447Myb domain, plants
PfamPF002493.0E-81364IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MGSSRSDGSG KERLRWTQEL HDQFVQAVNQ LGGPDRATPK GILKTMGIPE LNIYHVKSHL  60
QKYRISKYIP ETIGRGGKFE HRTISEMLPN FSTTSAAQLG EAIQMQMEVR RRMSDQLELP  120
SAPILLMLPS LCEESESNAK ESDSDSEADK IGEIHYNDPV EEYRAPKRLR VEHQDDVLSP  180
RFNDIASLEV ESYFPGMFLN SNDHQAQISY PAAHDINFAW NQLTACSSSP LVPSFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-231068159Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-231068159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-231068159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-231068159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-231068159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-231068159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-231068159Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-231068159Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018825807.11e-171PREDICTED: myb family transcription factor PHL7-like
SwissprotQ9SJW03e-39PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2I4F2D01e-169A0A2I4F2D0_JUGRE; myb family transcription factor PHL7-like
STRINGXP_006481047.16e-82(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106592535
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-41G2-like family protein