PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00007710-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | G2-like | ||||||||
Protein Properties | Length: 236aa MW: 26640.9 Da PI: 5.3492 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.2 | 2.8e-31 | 11 | 65 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLH++Fv+av+qLGG+++AtPk il++m+++ L ++hvkSHLQkYR+ WALNUT_00007710-RA 11 KERLRWTQELHDQFVQAVNQLGGPDRATPKGILKTMGIPELNIYHVKSHLQKYRI 65 68****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.052 | 8 | 68 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.0E-29 | 9 | 66 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.23E-17 | 10 | 65 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 6.5E-24 | 11 | 66 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.0E-8 | 13 | 64 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MGSSRSDGSG KERLRWTQEL HDQFVQAVNQ LGGPDRATPK GILKTMGIPE LNIYHVKSHL 60 QKYRISKYIP ETIGRGGKFE HRTISEMLPN FSTTSAAQLG EAIQMQMEVR RRMSDQLELP 120 SAPILLMLPS LCEESESNAK ESDSDSEADK IGEIHYNDPV EEYRAPKRLR VEHQDDVLSP 180 RFNDIASLEV ESYFPGMFLN SNDHQAQISY PAAHDINFAW NQLTACSSSP LVPSFF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-23 | 10 | 68 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-23 | 10 | 68 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-23 | 10 | 68 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-23 | 10 | 68 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-23 | 10 | 68 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-23 | 10 | 68 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-23 | 10 | 68 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-23 | 10 | 68 | 1 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018825807.1 | 1e-171 | PREDICTED: myb family transcription factor PHL7-like | ||||
Swissprot | Q9SJW0 | 3e-39 | PHL7_ARATH; Myb family transcription factor PHL7 | ||||
TrEMBL | A0A2I4F2D0 | 1e-169 | A0A2I4F2D0_JUGRE; myb family transcription factor PHL7-like | ||||
STRING | XP_006481047.1 | 6e-82 | (Citrus sinensis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10659 | 25 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 1e-41 | G2-like family protein |