PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00006989-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 311aa    MW: 36130.2 Da    PI: 6.2411
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00006989-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM132.62.7e-4181342128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                         +pG+rFhPt  elv +yLk+kv++++++  + i+ev+iyk+ PwdL+ k++++ ++++wyfF++ +kky++g++ nr+t+ g Wk+tgk k
  WALNUT_00006989-RA   8 QPGYRFHPTHVELVAFYLKRKVRSRRFRP-REIAEVNIYKYAPWDLKeKSISSsGDQKWYFFCPVEKKYRNGRKVNRSTEFGHWKSTGKCK 97 
                         59************************999.67**************95444433788********************************** PP

                 NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          v++ ++elvg ++t++f+++++++ e+tdWvmhey+l
  WALNUT_00006989-RA  98 LVHH-NEELVGSRRTMIFHRKSEEQRERTDWVMHEYSL 134
                         9999.999****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.29E-497157IPR003441NAC domain
PROSITE profilePS5100545.9557157IPR003441NAC domain
PfamPF023652.0E-229134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MGRTLRRQPG YRFHPTHVEL VAFYLKRKVR SRRFRPREIA EVNIYKYAPW DLKEKSISSS  60
GDQKWYFFCP VEKKYRNGRK VNRSTEFGHW KSTGKCKLVH HNEELVGSRR TMIFHRKSEE  120
QRERTDWVMH EYSLDYKNLA KEKDVQNTYV LCKIFQKEGQ GPRIGAQYGA PFKEEDWSDW  180
SDVEEADFAE DVDLAGRSTP NFMLPNNNIS SAGIVTTSLV GAMSESCRSE TVPSQCEGIS  240
VISCGDEKNK NLSHDEIDHE HDRFFHDLIN IINWDWDETA GPSLDGCNVQ EASFHQEDGF  300
SMNDLDTPLD S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-31516013171Stress-induced transcription factor NAC1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00583DAPTransfer from AT5G64060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018844732.10.0PREDICTED: NAC domain-containing protein 82-like
RefseqXP_018844733.10.0PREDICTED: NAC domain-containing protein 82-like
TrEMBLA0A2I4GLG60.0A0A2I4GLG6_JUGRE; NAC domain-containing protein 82-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33023465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.13e-61NAC domain containing protein 103