PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00006758-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 101aa    MW: 11826.1 Da    PI: 6.2462
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00006758-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.24.4e-12188351114
                 NAM  51 vkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlskkgelvglkktLvfykgrap 114
                         +++e++ewyfF+ + + +   + knr++   +g+Wk+  ++ ++++++g+++  kk L+f+++ ++
  WALNUT_00006758-RA  18 FSKEDREWYFFIYETEDSDVRTTKNRVVGngEGFWKSCQEEDPIYDADGNVIAFKKNLTFFSALQN 83 
                         556889************99******76545899***************************65333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100511.6741101IPR003441NAC domain
SuperFamilySSF1019416.54E-101979IPR003441NAC domain
PfamPF023651.1E-42283IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MHLGSYHKSL SYWIAVTFSK EDREWYFFIY ETEDSDVRTT KNRVVGNGEG FWKSCQEEDP  60
IYDADGNVIA FKKNLTFFSA LQNQRKHIGQ CKSTDATQEK I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018809654.13e-15PREDICTED: NAC domain-containing protein 48-like
TrEMBLA0A2I4DR777e-14A0A2I4DR77_JUGRE; NAC domain-containing protein 48-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144391218
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.12e-07NAC family protein