PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00005678-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family G2-like
Protein Properties Length: 346aa    MW: 39026.6 Da    PI: 9.9989
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00005678-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1017.8e-3267120255
             G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         prlrW+p+LH++Fv+ave+LGG+e+AtPk +l++m++kgL+++hvkSHLQ+YR+
  WALNUT_00005678-RA  67 PRLRWNPDLHRCFVQAVERLGGQERATPKLVLQVMNIKGLSIAHVKSHLQMYRS 120
                         8****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.1E-2963121IPR009057Homeodomain-like
PROSITE profilePS5129412.34963123IPR017930Myb domain
SuperFamilySSF466898.24E-1465121IPR009057Homeodomain-like
TIGRFAMsTIGR015575.0E-2367122IPR006447Myb domain, plants
PfamPF002497.6E-868119IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MMKSGYIDGS KFKSSSDRSE LDEERSDGDR SKNKNSASSS SNSIVEETDQ KMSSSIGVRP  60
YVRSKVPRLR WNPDLHRCFV QAVERLGGQE RATPKLVLQV MNIKGLSIAH VKSHLQMYRS  120
KKIDDQGQVI TSSRHVMGSA DRLWQQYSKL RGIDQRVSHK FRSYGDLCGN GQGSCVSMPY  180
LTHDRINLTD HSMNIKTRGS HLHDSEAGSW NSGGIDLKIR NGSLYLNNNI GFNNIGFGEQ  240
SIKRLQEFKE KFPWPFNHTS IKTQTSSSPI EIDDSSLSTE LHGRSGQEKT KYFIDSNTAV  300
LNQTKWVVGE EQATAGKRKG FHDDIDLSLS LSIRSRHEGA NKRICW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A5e-1868122357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-1868122357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-1868122357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-1868122357Protein PHOSPHATE STARVATION RESPONSE 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018828498.10.0PREDICTED: myb-related protein 2-like
TrEMBLA0A2I4FA320.0A0A2I4FA32_JUGRE; myb-related protein 2-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1655549
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-44G2-like family protein