PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00004105-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 384aa    MW: 42113.1 Da    PI: 4.5041
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00004105-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.12.5e-171711610127
                 NAM  10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
                         tdeel     +k ++g++++  +vi++v+ + + P++Lp      +  w+f ++++ k       n+    g+Wk++g+  e++s ++  +
  WALNUT_00004105-RA  17 TDEELFLS-FEKMISGSQFPS-NVITDVNPFLYMPSNLP------DGIWFFICSEEIK------DNK---VGFWKTKGNACEIFS-NSVIT 89 
                         89***977.58999****999.99**************9......3357776666554......345...59*************.999** PP

                 NAM 101 glkktLvfykgrapkgektdWvmheyr 127
                         gl++tL fy+g+ap+g ktdWvmh  r
  WALNUT_00004105-RA  90 GLRTTLEFYEGQAPHGCKTDWVMHKHR 116
                         ************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.5578140IPR003441NAC domain
PfamPF023652.7E-817116IPR003441NAC domain
SuperFamilySSF1019411.02E-2217139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    Send to blast
MSSPAVASLG YLKSNCTDEE LFLSFEKMIS GSQFPSNVIT DVNPFLYMPS NLPDGIWFFI  60
CSEEIKDNKV GFWKTKGNAC EIFSNSVITG LRTTLEFYEG QAPHGCKTDW VMHKHRILQR  120
EPCEGSKAKE ANFLCRVFLG GEQSQNHEME QKLASSGIQS ENYVHPAKSV AAESSIGQSS  180
TSKPQVIEDD STSRLALAER FPEPWLENLP EVDYLSGGDY MELLDLDNPA SPSSSSENSS  240
CVTMSSDGCF DALALLQDLE CGDSQKDVDL KFAVSSSLRP EEGVMFPPTS GSLVTGGRNM  300
LAPEEILNTD CFIPKSAACG QVIDNSFNRA IKNPKTNFGN EGPSSNSRNV TASLNSHIEA  360
PDGENRAAVD RKKNFMKYLC FMAF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018821574.10.0PREDICTED: NAC domain-containing protein 83-like isoform X2
RefseqXP_018821575.10.0PREDICTED: NAC domain-containing protein 83-like isoform X2
RefseqXP_018821576.10.0PREDICTED: NAC domain-containing protein 83-like isoform X2
RefseqXP_018821577.10.0PREDICTED: NAC domain-containing protein 83-like isoform X2
TrEMBLA0A2I4EQ940.0A0A2I4EQ94_JUGRE; NAC domain-containing protein 83-like isoform X2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105882235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.14e-19NAC domain containing protein 28