PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00001827-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 467aa    MW: 51522.2 Da    PI: 5.7525
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00001827-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY802.5e-25154210259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         +DgynWrKYGqK+vk+ + +rsYYrCt+++C++kk +e+s++ +++++i+Y+++H h+
  WALNUT_00001827-RA 154 SDGYNWRKYGQKQVKSPKGSRSYYRCTFSECCAKK-IECSDHSGHIIDIIYKSQHGHD 210
                         7********************************98.********************97 PP
2WRKY97.77.7e-31330386359
                         -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ ++ ++v+itY+g H+h+
  WALNUT_00001827-RA 330 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNASAVIITYKGVHDHD 386
                         9*******************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182904.58E-20148212IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.9E-21148212IPR003657WRKY domain
SMARTSM007744.0E-23153211IPR003657WRKY domain
PROSITE profilePS5081117.557154212IPR003657WRKY domain
PfamPF031064.1E-17155209IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.3E-32313388IPR003657WRKY domain
PROSITE profilePS5081131.732323388IPR003657WRKY domain
SuperFamilySSF1182904.18E-27324388IPR003657WRKY domain
SMARTSM007741.8E-35328387IPR003657WRKY domain
PfamPF031069.5E-24330385IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MAENGSSEAL HVENPKPHEE EEEDDNEEEV EEEAEEEESD DSEDVEEERE DEARLDLVVA  60
QDQLPQQEVV ATLTAQPADA LTQHKSQVSL CPTSSELSPT SVTQSILPLS SPTLREQRLS  120
QAKGNTECMP KTDQQSSSDL KSLSLVPVTK TPSSDGYNWR KYGQKQVKSP KGSRSYYRCT  180
FSECCAKKIE CSDHSGHIID IIYKSQHGHD PPRKFSCTKE NKLASSAKPV MGNSFAERPI  240
QMPNESEPLK VSEETIQETS PNPERKRQNS SDSNGNCEIK VKEEHANEPE PKRRQVVKKG  300
DLAHSGSVIK PGKKPKFVVH AAGDVGISGD GYRWRKYGQK MVKGNPHPRN YYRCTSAGCP  360
VRKHIETAVD NASAVIITYK GVHDHDMPVP KKRHGPPSAP LVAAAAPASM SNLQLKKTDK  420
LHNQSSSTQW SVDTEGELTG EAMELGGEKA MESARTLLSI GFEIKPC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-25316388274WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018823593.10.0PREDICTED: probable WRKY transcription factor 32 isoform X1
SwissprotP595831e-136WRK32_ARATH; Probable WRKY transcription factor 32
TrEMBLA0A2I4EW140.0A0A2I4EW14_JUGRE; probable WRKY transcription factor 32 isoform X1
STRINGEOY295590.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51983456
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-125WRKY DNA-binding protein 32