PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00000188-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | NAC | ||||||||
Protein Properties | Length: 289aa MW: 33193.5 Da PI: 6.3705 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165 | 2.6e-51 | 7 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhPtdeelv++yL++k+++ +l + +i+e+d+yk++Pw+Lp ++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk+ WALNUT_00000188-RA 7 LPPGFRFHPTDEELVNHYLCRKCASLPLAV-PIIREIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKP 96 79*************************999.88***************6666689************************************ PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + + g+kk Lvfy g+apkg+kt+W+mheyrl WALNUT_00000188-RA 97 IGK--PKPLGIKKALVFYAGKAPKGVKTNWIMHEYRL 131 *98..789***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.45E-62 | 4 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.945 | 7 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-27 | 8 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence Send to blast |
MTSELQLPPG FRFHPTDEEL VNHYLCRKCA SLPLAVPIIR EIDLYKFDPW QLPDMALYGE 60 KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP KPLGIKKALV FYAGKAPKGV 120 KTNWIMHEYR LANVDRSAGK KNNLRLDDWV LCRLYNKRGT VEKNYAMTEQ KMANSPEIEE 180 QKPKITASGQ YNIAPSSMIT GDQLHMDTSE SVPRLHTDTS SSEQVVSPDV TSWEKEVQSE 240 AKWEEIQNAF NSFDSFQCYN YMDGFAEDPF ASQVQYQMDQ ISPLQDMFM |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-82 | 3 | 163 | 11 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018827532.1 | 0.0 | PREDICTED: NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-124 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A2I4F7B2 | 0.0 | A0A2I4F7B2_JUGRE; NAC domain-containing protein 2-like | ||||
STRING | EOX92686 | 1e-156 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1258 | 34 | 108 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-116 | NAC family protein |