PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Jcr4S17311.10

Common Name

JCGZ_00723, LOC105633212

Organism

Jatropha curcas

Taxonomic ID

180498

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha

Family

NZZ/SPL

Protein Properties

Length: 332aa MW: 36352.6 Da PI: 9.3094

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Jcr4S17311.10	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	68.7	1.7e-21	33	330	38	314
NOZZLE 38 e.tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssv....aaisntatrlpvpvdrgvvlqgfps........... 117 + t+ksrgrkp ++k+p rgmgv +ler +++e k+++ +++ d+ ++ ++++ +p v+ g v g p Jcr4S17311.10 33 QpTRKSRGRKPSKGPP--RNKQP-QRGMGVEQLERLRLQERWKEITETNQVDSLNLqpdqLSVPDPIHSFP--VQYGTVSYGVPVingggflgfde 123 3489*****65444..44556.5****************99999888755221146777777777..899****988888777754 PP NOZZLE 118 .slgs..srilcggvg........sgqvmidpvi..spwgfvetsa..tthelss..isnpqmynassnnrcdtcfkkkrldgdqnnvvrsngggf 196 +ri gg g sgqv+++p +p v + t+ e+s s p+ + n d cfkkkr++g+ + + g Jcr4S17311.10 124 gG--LffKRIENGGFGqelnrshsSGQVLLNPYAfgAPDMRVRVGStgTAFEISNelTSMPKGMHNLDNIPSDVCFKKKRFNGES---IGYQNGSK 214 42..055888888876555555558***863357666655441156676653245566555556777********99...55555677 PP NOZZLE 197 skytmipppmngydeyllqsd......hhqrsqgflydqriaraasvsaasasinpyfneatnltg.sreefgsvlegnprngsrgvkeyeffpgk 285 k++ i p+n d l+ + h++ q + r ar+a f + nlt s + ++np g + ey+ffpgk Jcr4S17311.10 215 EKFAEIS-PINSSDFLGLNLEnkininHNNENQMGGFTARAARSA------------FYASHNLTDqSVQVVAVHRKANPTMGGNVFMEYDFFPGK 297 8999885.5788776555554000000333333333333333333............566788998677777888899************** PP NOZZLE 286 ydervskv.akv.aslvg..dcspntidlslkl 314 + + s + v + g c n++dlslkl Jcr4S17311.10 298 TNGKNSAEaLAVvGNAGGeaSCVSNSVDLSLKL 330 9887765313331333332258899*****8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	1.4E-19	20	330	IPR014855	Plant transcription factor NOZZLE

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0048653	Biological Process	anther development
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence Send to blast
MASSLPFLLR TTTEQTQRAS KTHIESESTK SDQPTRKSRG RKPSKGPPRN KQPQRGMGVE 60 QLERLRLQER WKEITETNQV DSLNLQPDQL SVPDPIHSFP VQYGTVSYGV PVINGGGFLG 120 FDEGGLFFKR IENGGFGQEL NRSHSSGQVL LNPYAFGAPD MRVRVGSTGT AFEISNELTS 180 MPKGMHNLDN IPSDVCFKKK RFNGESIGYQ NGSKEKFAEI SPINSSDFLG LNLENKININ 240 HNNENQMGGF TARAARSAFY ASHNLTDQSV QVVAVHRKAN PTMGGNVFME YDFFPGKTNG 300 KNSAEALAVV GNAGGEASCV SNSVDLSLKL SF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012071183.1	0.0	uncharacterized protein LOC105633212 isoform X2
TrEMBL	A0A067KRW5	0.0	A0A067KRW5_JATCU; Uncharacterized protein
STRING	cassava4.1_023704m	4e-64	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8365	17	23

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27330.1	5e-15	sporocyteless (SPL)

Link Out ? help Back to Top
Entrez Gene	105633212

Publications ? help Back to Top
Zhang L, et al. Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress. PLoS ONE, 2014. 9(5): p. e97878 [PMID:24837971]