PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S15311.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bZIP
Protein Properties Length: 231aa    MW: 25715.8 Da    PI: 4.5818
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S15311.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.86.6e-15159203448
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                     ++++r++kNRe+A rsR+RK+a + eLe  v eLe+eN++L ke
  Jcr4S15311.10 159 QQKQKRMIKNRESAARSRERKQAHTIELESLVRELEEENTRLLKE 203
                    689**************************************9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-10156214IPR004827Basic-leucine zipper domain
PfamPF001705.2E-13158203IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.726158203IPR004827Basic-leucine zipper domain
CDDcd147072.37E-20160202No hitNo description
SuperFamilySSF579591.5E-10160203No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-12161203No hitNo description
PROSITE patternPS000360163178IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MATTSSTNSD MPRQPSLCSS LSTLLADLQN QNQDQNQFTT TEQNPLVSTA MDDLLKNIYS  60
YPCDDHSPLP GCASKSVDEV WKEIVSGSXX XXLEDFLTKA GAVSEEDVKG VGVPAQMEMS  120
VGPYSVDINN HGMIMAEGGG RGRQKRRAVE EPPMDKATQQ KQKRMIKNRE SAARSRERKQ  180
AHTIELESLV RELEEENTRL LKEELGPLLV KMVGEGDINF FEQYSVQETT N
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012067143.11e-116G-box-binding factor 4
SwissprotP427771e-28GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A067L0U01e-115A0A067L0U0_JATCU; Uncharacterized protein
STRINGcassava4.1_033486m2e-62(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.12e-24G-box binding factor 4