PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Jcr4S12915.30

Common Name

JCGZ_15044

Organism

Jatropha curcas

Taxonomic ID

180498

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha

Family

bZIP

Protein Properties

Length: 376aa MW: 42463.8 Da PI: 4.4142

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Jcr4S12915.30	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.1	1.4e-06	177	235	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 k+++r + NR +A r ++Kk ++ Le k ++L +e +L l+ l+ e +l +e+ Jcr4S12915.30 177 KKAKRIITNRMSAVRAKEKKKLYTCMLEHKLQNLRSESATLNAHLSLLQTEGLSLNAEN 235 89**********************************************99988887765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.9E-4	173	237	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.4E-6	175	231	No hit	No description
Pfam	PF07716	2.4E-8	175	227	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.255	175	238	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.56E-8	177	231	No hit	No description
CDD	cd14703	2.73E-15	178	227	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence Send to blast
MMEEKQKASY RVEEEEEDDD DADSILQLLM DYEPTLNNHA ESKLITSDEI FVLPDHKNKE 60 SEASSSSSSH FPSKGKNNLD MDHEILEKCD EDDFFSKFLN ITDNNNDINV SSGIDNNPPS 120 SNVVEVDDDH VTSMAIPPET VVQPPQLPSG AITTRPRGIR KAISPETLAE LSIIDPKKAK 180 RIITNRMSAV RAKEKKKLYT CMLEHKLQNL RSESATLNAH LSLLQTEGLS LNAENVRLRE 240 QTGMTLQQIH LQDSLNDEIR NEIQHLKTLT QITSNHGIML NNTGNNHAHN NLAMDAPTGT 300 EQVGQLQVQN VDQQLEQFQQ GPVHVNAGQQ SPWQVQYDQE VNPQYHLQQE ENPPYIEDPN 360 ITNPLPYLQG EEDNDH

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence Send to blast

MMEEKQKASY RVEEEEEDDD DADSILQLLM DYEPTLNNHA ESKLITSDEI FVLPDHKNKE  60
SEASSSSSSH FPSKGKNNLD MDHEILEKCD EDDFFSKFLN ITDNNNDINV SSGIDNNPPS  120
SNVVEVDDDH VTSMAIPPET VVQPPQLPSG AITTRPRGIR KAISPETLAE LSIIDPKKAK  180
RIITNRMSAV RAKEKKKLYT CMLEHKLQNL RSESATLNAH LSLLQTEGLS LNAENVRLRE  240
QTGMTLQQIH LQDSLNDEIR NEIQHLKTLT QITSNHGIML NNTGNNHAHN NLAMDAPTGT  300
EQVGQLQVQN VDQQLEQFQQ GPVHVNAGQQ SPWQVQYDQE VNPQYHLQQE ENPPYIEDPN  360
ITNPLPYLQG EEDNDH

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012085550.1	0.0	probable transcription factor PosF21
TrEMBL	A0A067LLE6	0.0	A0A067LLE6_JATCU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF37279	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	3e-30	bZIP family protein

Publications ? help Back to Top
Zhang L, et al. Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress. PLoS ONE, 2014. 9(5): p. e97878 [PMID:24837971]