PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Jcr4S10848.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Family | bZIP | ||||||||
Protein Properties | Length: 167aa MW: 19562.2 Da PI: 10.8011 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.3 | 2.1e-10 | 101 | 150 | 3 | 52 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 + ++e++k+kNR +A rsRq+K ++ + +e v+eL +eN +++ +++l Jcr4S10848.10 101 QMRKEKKKIKNRASAARSRQKKIEKRKFMKEQVEELRKENVQMAWLIKKL 150 6799*************************************998766666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.6E-10 | 97 | 150 | No hit | No description |
SMART | SM00338 | 1.1E-4 | 99 | 159 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.9E-8 | 100 | 150 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.232 | 101 | 151 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.34E-8 | 102 | 151 | No hit | No description |
CDD | cd14686 | 5.25E-8 | 104 | 150 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 106 | 121 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
MFATSFISPF QLHRCEFIYT CIHLKQHDCH SHQEELSIFF FKKSPKSHCN ITVKKPIGLL 60 SIMAMLNSFG SGVQISQEWL QVDMLLVSGR KRIIEGSEQD QMRKEKKKIK NRASAARSRQ 120 KKIEKRKFMK EQVEELRKEN VQMAWLIKKL TVITTFLFIG KAKSKSK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012077862.1 | 7e-45 | ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
TrEMBL | A0A067KMU9 | 2e-43 | A0A067KMU9_JATCU; Uncharacterized protein | ||||
STRING | XP_002537820.1 | 2e-17 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF27059 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36270.1 | 2e-08 | bZIP family protein |