PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S09941.10
Common NameJCGZ_26777, LOC105630130
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bZIP
Protein Properties Length: 152aa    MW: 17024.2 Da    PI: 9.7599
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S09941.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.37e-133285558
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
                   ++ +r+++NRe+ArrsR RK++ ++ L   v++L +e ++L   ++  +++  +
  Jcr4S09941.10 32 RKRKRMISNRESARRSRMRKQKHLDDLIAQVAQLRKESHQLLTSINITTQHFLN 85
                   6789*************************************9999877776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.5E-182892IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.1283093IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.9E-113077No hitNo description
SuperFamilySSF579591.85E-123284No hitNo description
PfamPF001704.2E-103277IPR004827Basic-leucine zipper domain
CDDcd147028.48E-193383No hitNo description
PROSITE patternPS0003603550IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MASSSGTTTS SGSTLMQNSG SEEDLRALMD QRKRKRMISN RESARRSRMR KQKHLDDLIA  60
QVAQLRKESH QLLTSINITT QHFLNIEADN SILRAQVGAL SHRLQSLNEI IAFLSANNGF  120
LAEEPAADSF LNPLNMSYLN QPIMASADIF QY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13152RKRKRMISNRESARRSRMRKQK
24451RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012067226.11e-106bZIP transcription factor 11 isoform X1
SwissprotC0Z2L53e-54BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A067LCG71e-105A0A067LCG7_JATCU; Uncharacterized protein
STRINGcassava4.1_028474m5e-78(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.11e-53basic leucine-zipper 44
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  3. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]