PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Jcr4S09910.10 | ||||||||
Common Name | JCGZ_15996, LOC105630813 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Family | bZIP | ||||||||
Protein Properties | Length: 153aa MW: 17647.9 Da PI: 9.2375 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.8 | 2.8e-14 | 64 | 118 | 5 | 59 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 ++ rr+++NRe+ArrsR RKk +e+L+ v L +N++Lkk+l + +++ l Jcr4S09910.10 64 RKRRRMISNRESARRSRWRKKRHVENLTVQVNRLGIQNQELKKRLGSVLDHCHVL 118 5789*****************************************9999999766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.5E-12 | 60 | 115 | No hit | No description |
SMART | SM00338 | 3.3E-14 | 60 | 124 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.358 | 62 | 111 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.3E-13 | 64 | 121 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.34E-12 | 64 | 118 | No hit | No description |
CDD | cd14702 | 2.18E-14 | 65 | 116 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 67 | 82 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
MFLAQDSVQF DYPVLETGFT ASEIEELLSL LESPSSTSSP PSSTSSPNSG SEESNRVVYS 60 VDERKRRRMI SNRESARRSR WRKKRHVENL TVQVNRLGIQ NQELKKRLGS VLDHCHVLWR 120 ENNQLTTEYL ALQARLSDLC HTLVAMQTMQ RLQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 63 | 67 | RKRRR |
2 | 65 | 84 | RRRMISNRESARRSRWRKKR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012068179.1 | 1e-109 | basic leucine zipper 4 | ||||
TrEMBL | A0A067LBW0 | 1e-108 | A0A067LBW0_JATCU; Uncharacterized protein | ||||
STRING | cassava4.1_031242m | 2e-65 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5996 | 30 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59530.1 | 1e-21 | basic leucine-zipper 4 |
Link Out ? help Back to Top | |
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Entrez Gene | 105630813 |
Publications ? help Back to Top | |||
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