PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S06409.10
Common NameJCGZ_15213, LOC105640154
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bZIP
Protein Properties Length: 369aa    MW: 41352.1 Da    PI: 8.2332
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S06409.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1439.7e-14287338556
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                    +r+rr++kNRe+A rsR+RK+a++ eLe +  +L++eN +Lk+ +ee++++ 
  Jcr4S06409.10 287 RRQRRMIKNRESAARSRARKQAYTVELELELNQLKEENAKLKQLVEEIEQNR 338
                    69************************************99998888877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.2E-10283344IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.415285337IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.1E-13286337No hitNo description
SuperFamilySSF579592.25E-10287336No hitNo description
PfamPF001706.2E-12287338IPR004827Basic-leucine zipper domain
CDDcd147071.06E-24287334No hitNo description
PROSITE patternPS000360290305IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0033613Molecular Functionactivating transcription factor binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MVLSEPDTIA YDTDTKPSSP HLLHQQPLQE DSLKDSSFSP VNGQNSLLSL TLNEIQHKSG  60
KSFGSMNMDE FLANLWSSVD ENQVTSQPSN QNQNQNSSKE NGTNNNNHNN NANGGVNPTS  120
LARQGSFSIP APLCKKTVDE VWFEIQKDRA DPQKPNNIGP HEPPRRQQTL GEMTLEDFLV  180
KAGIVQESPA ESSQSKMITP IQNLNNCLDA TFGMGQVMGI GFSAHQTIGN SFSTSNGFTP  240
YQMFPQNKGF MGEAPSNAKN EQGQFDMGAQ QSKKRIIDGP PEVVVERRQR RMIKNRESAA  300
RSRARKQAYT VELELELNQL KEENAKLKQL VEEIEQNRKE EVLRRKPSTM PQKKADKLRS  360
IRRTVSLTW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012079779.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLA0A067K9520.0A0A067K952_JATCU; Uncharacterized protein
STRINGXP_002523794.10.0(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20923374
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.19e-63bZIP family protein
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]