PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S05310.40
Common NameJCGZ_12566, LOC105639998
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bZIP
Protein Properties Length: 195aa    MW: 22638.2 Da    PI: 9.9713
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S05310.40genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.81.8e-1187143561
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                    ++ rr+++NRe+ArrsR RK++ +e+L++ v  L  eN++L ++l     ++++++ 
  Jcr4S05310.40  87 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRIENRELTNRLRFVLYHCQSVRR 143
                    5789**************************************999877777777665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-980132No hitNo description
SMARTSM003381.0E-1283147IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.72685131IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.44E-1187135No hitNo description
PfamPF001701.2E-887142IPR004827Basic-leucine zipper domain
CDDcd147021.13E-1888139No hitNo description
PROSITE patternPS00036090105IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MSSTVPTPAF FLSDPMFGDQ FPSFENGGFT PWDCSELLAS EAQDHDDHNN TQLSPKPVGS  60
GSSSGSDEPS EPNRSDQTST VSVIDERKRR RMISNRESAR RSRMRKQKHL ENLRNQVNRL  120
RIENRELTNR LRFVLYHCQS VRRDNDRLRS EHSMLRQKLS NIRQILMFRQ LQQFTSAWPC  180
NNLITTEQNP SLITS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18690RKRRR
286107RKRRRMISNRESARRSRMRKQK
399106RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012079592.11e-142basic leucine zipper 4
TrEMBLA0A067KIL31e-141A0A067KIL3_JATCU; Uncharacterized protein
STRINGXP_002533570.13e-83(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.19e-41basic leucine-zipper 5
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]