PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Jcr4S04497.20 | ||||||||
Common Name | JCGZ_09225 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Family | BES1 | ||||||||
Protein Properties | Length: 218aa MW: 23143.7 Da PI: 8.6028 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 115.9 | 5.9e-36 | 4 | 102 | 3 | 96 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr.kgskpl....eeaeaagssasaspess 93 s ++++ E+E++k+RER+RRai++ki+ GLR++G+y+l raD+neVl+ L++eAGw+ve+DGtt+r k ++ ++ + +s++++p+ss Jcr4S04497.20 4 SSSTRSESEKEKTKLRERQRRAITTKIFHGLRRHGGYHLSPRADINEVLRELAKEAGWIVEPDGTTHRcKLLNRCptcgATPFQNYTSTTTTPTSS 99 66778899************************************************************5222222223333444445555555555 PP DUF822 94 lqs 96 ++ Jcr4S04497.20 100 STV 102 443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.6E-32 | 5 | 138 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MVGSSSTRSE SEKEKTKLRE RQRRAITTKI FHGLRRHGGY HLSPRADINE VLRELAKEAG 60 WIVEPDGTTH RCKLLNRCPT CGATPFQNYT STTTTPTSSS TVIVGGSGAG GVTGGECSTT 120 TSPRQFDPTT MIVNSNNNNG ELTTTTATSS PYICSDGASG CEVEIPLAFY MYRGIGGATV 180 AGGGMKVAVP GHQQPQQQEA RTSNQNTPVG SPLHHSSN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012075632.1 | 1e-161 | protein BZR1 homolog 3 | ||||
TrEMBL | A0A067KFN1 | 1e-159 | A0A067KFN1_JATCU; Uncharacterized protein | ||||
STRING | cassava4.1_033592m | 1e-81 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13979 | 16 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 4e-16 | beta-amylase 7 |
Publications ? help Back to Top | |||
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