PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Jcr4S04480.30 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Family | bZIP | ||||||||
Protein Properties | Length: 177aa MW: 19628.9 Da PI: 8.5085 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 22.6 | 2.4e-07 | 129 | 156 | 26 | 53 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 26 aeieeLeekvkeLeaeNkaLkkeleelk 53 a++++Le+ vkeLe+eN +L+++leel Jcr4S04480.30 129 AYTQQLENTVKELEQENARLRSQLEELY 156 89**********************9996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-5 | 129 | 155 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence Send to blast |
MLSSTADRES TRNRLNRLSS SSSSSTSSSS SPSPFCHNTQ KAKTMEEVWK DINLASLHDN 60 HSSDPNPNFI LQDFFARPFN KDPPKRLVST TTKNAAVTAA APATVLSLNS IPVGFDFLEN 120 SDPLIIRPAY TQQLENTVKE LEQENARLRS QLEELYLAAA AQLPKKHMLH RTSTAPF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020540142.1 | 7e-67 | protein FD | ||||
TrEMBL | A0A067JJ22 | 4e-66 | A0A067JJ22_JATCU; Uncharacterized protein | ||||
STRING | cassava4.1_021397m | 4e-35 | (Manihot esculenta) | ||||
STRING | XP_002531142.1 | 7e-35 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3755 | 32 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 1e-10 | bZIP family protein |