PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S04285.70
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family FAR1
Protein Properties Length: 520aa    MW: 60548.9 Da    PI: 9.1067
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S04285.70genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR141.16e-132098290
           FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                   +Y ++Ak  GFsv +++ +k  r g+   +t  C k  k++ + k+         ++rt+C ak+   ++k+g wevtk+++ HnHel 
  Jcr4S04285.70 20 CYLKHAKARGFSVARKSGSKD-RGGNKRYYTISCDKGRKPTASFKE---------SKRTDCPAKVSAVLRKNGFWEVTKINTYHNHELE 98
                   799*************99988.7888999*******9999988777.........9*******************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.3E-102098IPR004330FAR1 DNA binding domain
PfamPF105511.3E-15218283IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    Send to blast
MNWVPESECC SSNLESLFKC YLKHAKARGF SVARKSGSKD RGGNKRYYTI SCDKGRKPTA  60
SFKESKRTDC PAKVSAVLRK NGFWEVTKIN TYHNHELETM SSFMHGHRNL DSTMKRKLEA  120
NDIAGIRSCK SIKLMIVEAG GPKKMTCSVK DCRNYIEARR RLRLGDGDAE SITRMFSSMQ  180
LKDRNVFHLV DTDNDGRLRN VIWVHCRIRA AYEEFNDVIC FDTTYLVNRY KMLFATIVGV  240
DHHGQSILLG CALIPREDTV ANKWNFRNWL AAMGGIAREA IMTISVKFKH IEKFKKAEDN  300
FKGLIYDSLT VEMFETQWVE FLRKHEVESN EWLLKLYLER RRWVPVYLND TFWDSRTIRC  360
SCLELPTEER VNQFDENGRD SKIFFDGGFP SMTRDYEKFR ELEKCFDECY ELAETSIAWM  420
NHLKVSLNNF KDSLRSLNDA EVAAENDDEV AGRGKKEFET NENIDRNPML DPHATRSRGR  480
PRINRVRRGY RVHRAFTGNM SRAPGEVLQS RTQYGTHTNY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012065921.10.0protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A022RAH91e-93A0A022RAH9_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.M00234.1.p6e-98(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF4030530
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-45FAR1-related sequence 5