PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S03352.20
Common NameJCGZ_09423, WRKY12
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family WRKY
Protein Properties Length: 68aa    MW: 7733.51 Da    PI: 8.0591
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S03352.20genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY49.31e-151372359
                   EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY 23 sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                   +YY+C+s gC+vkk+ver++ed ++v++tY g Hnhe
  Jcr4S03352.20  1 NYYKCSSGGCNVKKRVERDREDSRYVITTYDGIHNHE 37
                   5***********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081118.544139IPR003657WRKY domain
SMARTSM007745.1E-7138IPR003657WRKY domain
PfamPF031061.3E-10137IPR003657WRKY domain
SuperFamilySSF1182901.31E-12139IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-14139IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    Send to blast
NYYKCSSGGC NVKKRVERDR EDSRYVITTY DGIHNHESPC MVYYNQMPLL VPNAWTSQAS  60
SPHSSSSS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Involved in defense responses. May act as positive regulator of salicylic acid (SA)-mediated signaling and negative regulator of jasmonic acid (JA)-mediated signaling (PubMed:21030507). {ECO:0000250, ECO:0000269|PubMed:21030507}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC4852641e-110KC485264.1 Jatropha curcas WRKY transcription factor 12 (WRKY12) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012075251.16e-44probable WRKY transcription factor 51
SwissprotQ93WU91e-19WRK51_ARATH; Probable WRKY transcription factor 51
TrEMBLS5CKE42e-42S5CKE4_JATCU; WRKY transcription factor 12
STRINGXP_010243312.11e-32(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112034110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.11e-21WRKY DNA-binding protein 51
Publications ? help Back to Top
  1. Xiong W, et al.
    Genome-wide analysis of the WRKY gene family in physic nut (Jatropha curcas L.).
    Gene, 2013. 524(2): p. 124-32
    [PMID:23644253]
  2. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]
  3. Yan C, et al.
    Injury Activates Ca2+/Calmodulin-Dependent Phosphorylation of JAV1-JAZ8-WRKY51 Complex for Jasmonate Biosynthesis.
    Mol. Cell, 2018. 70(1): p. 136-149.e7
    [PMID:29625034]