PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Jcr4S03297.40 | ||||||||
Common Name | JCGZ_00723, LOC105633212 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Family | NZZ/SPL | ||||||||
Protein Properties | Length: 332aa MW: 36352.6 Da PI: 9.3094 | ||||||||
Description | NZZ/SPL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NOZZLE | 68.7 | 1.7e-21 | 33 | 330 | 38 | 314 |
NOZZLE 38 e.tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssv....aaisntatrlpvpvdrgvvlqgfps........... 117 + t+ksrgrkp ++k+p rgmgv +ler +++e k+++ +++ d+ ++ ++++ +p v+ g v g p Jcr4S03297.40 33 QpTRKSRGRKPSKGPP--RNKQP-QRGMGVEQLERLRLQERWKEITETNQVDSLNLqpdqLSVPDPIHSFP--VQYGTVSYGVPVingggflgfde 123 3489*******65444..44556.5********************99999888755221146777777777..899********988888777754 PP NOZZLE 118 .slgs..srilcggvg........sgqvmidpvi..spwgfvetsa..tthelss..isnpqmynassnnrcdtcfkkkrldgdqnnvvrsngggf 196 +ri gg g sgqv+++p +p v + t+ e+s s p+ + n d cfkkkr++g+ + + g Jcr4S03297.40 124 gG--LffKRIENGGFGqelnrshsSGQVLLNPYAfgAPDMRVRVGStgTAFEISNelTSMPKGMHNLDNIPSDVCFKKKRFNGES---IGYQNGSK 214 42..055888888876555555558*******863357666655441156676653245566555556777************99...55555677 PP NOZZLE 197 skytmipppmngydeyllqsd......hhqrsqgflydqriaraasvsaasasinpyfneatnltg.sreefgsvlegnprngsrgvkeyeffpgk 285 k++ i p+n d l+ + h++ q + r ar+a f + nlt s + ++np g + ey+ffpgk Jcr4S03297.40 215 EKFAEIS-PINSSDFLGLNLEnkininHNNENQMGGFTARAARSA------------FYASHNLTDqSVQVVAVHRKANPTMGGNVFMEYDFFPGK 297 8999885.5788776555554000000333333333333333333............566788998677777888899****************** PP NOZZLE 286 ydervskv.akv.aslvg..dcspntidlslkl 314 + + s + v + g c n++dlslkl Jcr4S03297.40 298 TNGKNSAEaLAVvGNAGGeaSCVSNSVDLSLKL 330 9887765313331333332258899*******8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF08744 | 1.4E-19 | 20 | 330 | IPR014855 | Plant transcription factor NOZZLE |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0048653 | Biological Process | anther development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence Send to blast |
MASSLPFLLR TTTEQTQRAS KTHIESESTK SDQPTRKSRG RKPSKGPPRN KQPQRGMGVE 60 QLERLRLQER WKEITETNQV DSLNLQPDQL SVPDPIHSFP VQYGTVSYGV PVINGGGFLG 120 FDEGGLFFKR IENGGFGQEL NRSHSSGQVL LNPYAFGAPD MRVRVGSTGT AFEISNELTS 180 MPKGMHNLDN IPSDVCFKKK RFNGESIGYQ NGSKEKFAEI SPINSSDFLG LNLENKININ 240 HNNENQMGGF TARAARSAFY ASHNLTDQSV QVVAVHRKAN PTMGGNVFME YDFFPGKTNG 300 KNSAEALAVV GNAGGEASCV SNSVDLSLKL SF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012071183.1 | 0.0 | uncharacterized protein LOC105633212 isoform X2 | ||||
TrEMBL | A0A067KRW5 | 0.0 | A0A067KRW5_JATCU; Uncharacterized protein | ||||
STRING | cassava4.1_023704m | 4e-64 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF8365 | 17 | 23 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27330.1 | 5e-15 | sporocyteless (SPL) |
Link Out ? help Back to Top | |
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Entrez Gene | 105633212 |
Publications ? help Back to Top | |||
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