PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S03002.10
Common NameJCGZ_15194, LOC105640937
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bZIP
Protein Properties Length: 298aa    MW: 32183 Da    PI: 5.2946
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S03002.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.2e-14247292348
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                    + +r+rr++kNRe+A rsR+RK+a++ eLe  +  LeaeN++L ke
  Jcr4S03002.10 247 AQQRQRRMIKNRESAARSRERKQAYQVELESMAVRLEAENERLLKE 292
                    679***************************************9886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.0E-5245298IPR004827Basic-leucine zipper domain
PfamPF001707.1E-13247292IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.553247292IPR004827Basic-leucine zipper domain
CDDcd147072.34E-17249294No hitNo description
SuperFamilySSF579592.88E-9249292No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-12250292No hitNo description
PROSITE patternPS000360252267IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MASSKVMASS KPKNSDLTSS SAATRSRRAS ASSSSAGLAS ASTKPQSNRI KSFYRNLTSS  60
SSLASTMTVD GILRDVYSTP SAESTLLDAQ ITLIDTPTPV LPTSPPPTLQ TATIIETTNH  120
ASNSSNQEMN SVVLPQSNKT VDDVWREIVA GRKEMKEEPD EMMTLEDFLA KAGAADVEQD  180
DEVKMPSGGV YAFDPVPPSA FQMLDKVEGS IVGFGNGVEV VAGSEGTVLG RGKRGRAAVM  240
EPLDKAAQQR QRRMIKNRES AARSRERKQA YQVELESMAV RLEAENERLL KEKIDYSD
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012080744.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 3 isoform X2
SwissprotP427773e-41GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A067KEV00.0A0A067KEV0_JATCU; Uncharacterized protein
STRINGcassava4.1_010851m1e-115(Manihot esculenta)
STRINGcassava4.1_012477m1e-115(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.12e-57bZIP family protein
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]