PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Jcr4S02217.10 | ||||||||
Common Name | JCGZ_19423 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Family | GATA | ||||||||
Protein Properties | Length: 219aa MW: 22795.3 Da PI: 10.3302 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 23.1 | 1e-07 | 190 | 211 | 1 | 20 |
GATA 1 Cs..nCgttkTplWRrgpdgnk 20 C+ nC+t +Tp+WR+gp g+k Jcr4S02217.10 190 CTncNCNTNDTPMWRKGPLGPK 211 7744677777**********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.50.10 | 3.8E-4 | 186 | 209 | IPR013088 | Zinc finger, NHR/GATA-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MMMGGGRAAT NNYGMGGGNY GMRGGGAAAN NYGMEGGNYG MRGGGAGTNN YGIRGGNYGM 60 TGGRLATNNY EMGGGRAAIN NYGIGGGGVV TNNYGIGEGG AAINHYGMIN RTGNAASTSG 120 ILRHYQQYAT GIPAYQNING GLTLPPFQPH SLTSYTLLDY SPFKPHQTGK PSSVARRPRN 180 GNNVNPHRRC TNCNCNTNDT PMWRKGPLGP KEGKAGRKT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012093241.1 | 5e-89 | GATA zinc finger domain-containing protein 7 | ||||
Refseq | XP_012093243.1 | 5e-89 | GATA zinc finger domain-containing protein 7 | ||||
TrEMBL | A0A067LB01 | 1e-147 | A0A067LB01_JATCU; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13778 | 16 | 22 |
Publications ? help Back to Top | |||
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