PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Jcr4S02010.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Family | GeBP | ||||||||
Protein Properties | Length: 111aa MW: 13354.2 Da PI: 5.6572 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 79.3 | 6.1e-25 | 4 | 88 | 12 | 97 |
DUF573 12 eivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ei++L+G+idf+++tg + d+++af ef+k+ +++kv ++ql +Ki rLKkK+k+++++ ++g+ +f k+h++k+f ls iWg Jcr4S02010.10 4 EITVLKGMIDFHETTGNYACDNVTAFLEFIKDFLHVKVCQKQLYDKIWRLKKKYKNNKERLEDGQTLDFLKSHEEKMFMLS-LIWG 88 9*****************************************************************************997.6887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.2E-20 | 4 | 88 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 111 aa Download sequence Send to blast |
NPTEITVLKG MIDFHETTGN YACDNVTAFL EFIKDFLHVK VCQKQLYDKI WRLKKKYKNN 60 KERLEDGQTL DFLKSHEEKM FMLSLIWGSE NKEKKEGEED EFWSMYPHLN E |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022930845.1 | 8e-20 | STOREKEEPER protein-like | ||||
Refseq | XP_023531444.1 | 7e-20 | STOREKEEPER protein-like | ||||
TrEMBL | A0A0A0K1N4 | 5e-18 | A0A0A0K1N4_CUCSA; Uncharacterized protein | ||||
STRING | XP_004174048.1 | 2e-19 | (Cucumis sativus) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1831 | 34 | 90 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 5e-14 | DNA-binding storekeeper protein-related transcriptional regulator |