PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S01221.80
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bZIP
Protein Properties Length: 381aa    MW: 41822.6 Da    PI: 8.2097
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S01221.80genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.77.7e-11104139540
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                    k  rr+++NReAAr+sR+RKka++++Le     L++
  Jcr4S01221.80 104 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLTQ 139
                    7789***********************986555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-897146No hitNo description
SMARTSM003381.8E-7100179IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.266102146IPR004827Basic-leucine zipper domain
CDDcd147089.12E-21104149No hitNo description
PfamPF001704.9E-8104142IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.06E-7104146No hitNo description
PROSITE patternPS000360107122IPR004827Basic-leucine zipper domain
PfamPF141448.0E-31195268IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MCVYAEGGGM RPPTLNIFPS QPMHAVEPSS TKGNTPGLVS PATSGSKRPS EQSMELANAR  60
NDSAAAAAAA SGPEPAKSVK REGNRKGPTT SSSEQEGPKT PDPKTLRRLA QNREAARKSR  120
LRKKAYVQQL ESSRIRLTQL EQELQRARAQ GLFFGGGGLM GGDQGLPIGI NNISSDAAVF  180
DIEYARWLEE HHRLTCELRA AVQEHLPENE LRLFVDNCLA HYDEVISLKG MVAKSDVCHL  240
VSGMWKTPAE RCFMWMGGFR PSELIKIILN QIEPLTEQQI LGICGLQQST QEAEEALSQG  300
LEALNQSLSD TIASDSLSCP PNMANYMGQM AVAMNKLSTL EGFVRQVNKN RNMFLFPFGL  360
GKPNRPKCMN YSMSYLREVH G
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020539935.10.0bZIP transcription factor TGA10 isoform X1
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A067JYH80.0A0A067JYH8_JATCU; Uncharacterized protein
STRINGXP_002532393.10.0(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-145bZIP family protein