PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S01086.80
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bZIP
Protein Properties Length: 476aa    MW: 51403 Da    PI: 6.7918
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S01086.80genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_153.16.8e-17237292358
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                    + kr rr+ +NRe+ArrsR+RK+a + eLe+ v++L  eN++L k+l+ +++++  
  Jcr4S01086.80 237 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENSSLLKRLSDISNKYND 292
                    689*********************************************99999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.2E-13231290No hitNo description
SMARTSM003385.3E-20235299IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.611237291IPR004827Basic-leucine zipper domain
PfamPF001703.5E-14238291IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-11239289No hitNo description
PROSITE patternPS000360242257IPR004827Basic-leucine zipper domain
PfamPF124986.8E-38348466IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    Send to blast
MDRVFSVDEI SDQFWSPPPP PQLPPSAQLD DSSKMNRSAS EWAFQRFLQE ASVASDSSPQ  60
SSSPPSGSID KTDVVEIKDN DSVSNANGNT TAPSSFINGR CSPPFNVAAA APCAPPNIPV  120
DSKEYQAFLK SQLSLACAAV ALSRAPFLKS QDSPARADSG SQASNTSQSG SHVPKGAGND  180
LSRPQDTDAN GLVGIHSSTQ KKSGVPMKST TSGSSREQSE DDENEGETEM NMKDPADAKR  240
VRRMLSNRES ARRSRRRKQA HLTELETQVA QLRVENSSLL KRLSDISNKY NDASVDNRVL  300
KADVETLRAK VSPLTIVNRL EFRGGWFILQ SPQQNYYAVL ADHSPPLVKM AEETVKRITG  360
LNPLSHSMPE ISTISMPSFD GSPSDTLTDA AVPIQDEPKR LYQLPNNPLS TRDPRVNNGL  420
TNISSAENIQ PPSGTAGLAG NKIGRTASLQ RVASLEHLQK RICGTPCGPQ SNVEQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1251258RRSRRRKQ
2253258SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012089255.10.0light-inducible protein CPRF2
SwissprotQ990901e-118CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A067JI800.0A0A067JI80_JATCU; Uncharacterized protein
STRINGcassava4.1_007837m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.29e-69bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]