PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Jcr4S00865.40 | ||||||||
Common Name | JCGZ_12265 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Family | BES1 | ||||||||
Protein Properties | Length: 249aa MW: 26612.6 Da PI: 7.2159 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 41.2 | 6.3e-13 | 7 | 80 | 72 | 149 |
DUF822 72 gskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149 gskp+ e+ag+ +++s +ss+q s++ss+++spv+sy+ sp+sssfpsp+++d +++ + llp+l++ ++++++ Jcr4S00865.40 7 GSKPP-PLEIAGTPTNISACSSIQPSPQSSNFPSPVPSYHVSPTSSSFPSPTRFDANPS---TYLLPFLRNIASIPAN 80 56777.899************************************************88...5999999999887765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.1E-8 | 7 | 61 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MRMGTLGSKP PPLEIAGTPT NISACSSIQP SPQSSNFPSP VPSYHVSPTS SSFPSPTRFD 60 ANPSTYLLPF LRNIASIPAN LPQLRISNSA PVTPPLSSPT NRSSKRKADW ESFSNGSLNS 120 FRHPLFAVSA PSSPTRRQHL TPATIPECDE SDASTVDSGR WVSFQAVAPQ VAPPSPTFNL 180 VKPIGQQSMF QDGIDHGHGG FGWGAGAERG RGSEFEFENG RVKPWEGERI HEIGVDDLEL 240 TLGSAKAHG |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012079081.1 | 1e-173 | BES1/BZR1 homolog protein 2 | ||||
Swissprot | Q94A43 | 2e-81 | BEH2_ARATH; BES1/BZR1 homolog protein 2 | ||||
TrEMBL | A0A067KJ02 | 1e-171 | A0A067KJ02_JATCU; Uncharacterized protein | ||||
STRING | XP_002525100.1 | 1e-135 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1275 | 34 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75080.2 | 7e-50 | BES1 family protein |
Publications ? help Back to Top | |||
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