PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S00645.40
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family NF-X1
Protein Properties Length: 941aa    MW: 102076 Da    PI: 7.9838
Description NF-X1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S00645.40genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-NF-X124.55.7e-08233251119
       zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                    CG+H+C+k+CH GpC+pC+
  Jcr4S00645.40 233 CGRHRCEKICHVGPCDPCQ 251
                    ******************6 PP
2zf-NF-X118.25.3e-06297314118
       zf-NF-X1   1 CGkHkCqklCHeGpCppC 18 
                    CG+H+C+++CH+G C+ C
  Jcr4S00645.40 297 CGNHTCGETCHPGFCGDC 314
                    ****************99 PP
3zf-NF-X118.93.4e-06375393119
       zf-NF-X1   1 CGkHkCqklCHeGpCppCp 19 
                    CG+H+C++lCH G CppC 
  Jcr4S00645.40 375 CGQHSCESLCHSGHCPPCL 393
                    ******************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM00438190161196IPR000967Zinc finger, NF-X1-type
CDDcd060087.61E-13223271No hitNo description
PfamPF014222.5E-6233250IPR000967Zinc finger, NF-X1-type
SMARTSM004385.4E-5233252IPR000967Zinc finger, NF-X1-type
CDDcd060082.09E-7287320No hitNo description
PfamPF014220.0014297314IPR000967Zinc finger, NF-X1-type
SMARTSM004380.0038297316IPR000967Zinc finger, NF-X1-type
CDDcd060081.82E-9365408No hitNo description
PfamPF014228.3E-5375392IPR000967Zinc finger, NF-X1-type
SMARTSM004382.0E-4375394IPR000967Zinc finger, NF-X1-type
CDDcd060087.18E-6422470No hitNo description
PfamPF014222.2432449IPR000967Zinc finger, NF-X1-type
SMARTSM004380.026432450IPR000967Zinc finger, NF-X1-type
CDDcd060087.86E-5475516No hitNo description
PfamPF014221.9485503IPR000967Zinc finger, NF-X1-type
SMARTSM004382485505IPR000967Zinc finger, NF-X1-type
CDDcd060082.42E-5513562No hitNo description
PfamPF0142252517543IPR000967Zinc finger, NF-X1-type
SMARTSM004380.055524545IPR000967Zinc finger, NF-X1-type
PfamPF014241.8E-4675720IPR001374R3H domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009642Biological Processresponse to light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009697Biological Processsalicylic acid biosynthetic process
GO:0010188Biological Processresponse to microbial phytotoxin
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003676Molecular Functionnucleic acid binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 941 aa     Download sequence    Send to blast
MSFPSRSDQR DRTNRSQNAR QTWVPRGSGP TVAVNRPTSF NSTPERNDGG HPNHSSVPSN  60
PRHGGNANIN TNSNPSRGGR KTWPTNHRRD RERSQTQEVE LKDPNMPQLV QEIQDKLVKG  120
TVECMICYDM LRRVRVFNWR CPGCQSVQLT SLKEIRYVCF CGKRTDPPSD LYLTPHSCGE  180
PCGKPLERGP CPPCKAFAPP RMCPCGKKII TTRCSDRISV LTCGQRCDKL LECGRHRCEK  240
ICHVGPCDPC QVLVNASCFC RKTLEVVLCG DMAVRGEVKA EDGVFSCNST CGKMLGCGNH  300
TCGETCHPGF CGDCDLMPGQ GEVLSISGNL AVGRRIVVGI DVVKGAALFP THIMFSLNDW  360
DPHFCQMACG KKLRCGQHSC ESLCHSGHCP PCLETIFTDL SCACGRTSIP PPLPCGTPPP  420
SCQLPCSVPQ PCGHSASHSC HFGDCPPCSV PIAKECVGGH VVLGNIPCGS KDIRCNKLCG  480
KTRQCGLHAC GRTCHPPPCD PSCGTEAGSK SSCGQTCGAP RRDCRHTCTA LCHPSTSCPD  540
VRCEFPVTIT CSCGRITASV PCDAGGSSSG FNADTVFEAS IVQKLPVPLQ TVESTGKRIP  600
LGQRKLICDD ECAKLERKRV LADAFDITPP SLEALHFGEN SAVTELLADL YRRDPRWVLG  660
VEERCKYLLL GKTRGSLTGL KVHVFCPMLK DKRDAVRLIA ERWKLAIYSA GWEPKRFIVV  720
HVTPKSKPPS RVIGVKGTTT LTAPHPPAFD PLVDMDPRLV VSFLDLPREA DISSLVLRFG  780
GECELVWLND KNALAWLRQP TNPWGGAAGT AKDGGAVAAL KPWRKAVVLE HGRREDSWGS  840
EEWSHGSADV QASAWKGKEA PIAASINRWS VLDSEVAVSS SAASVRTEDP TKRAGSCSNS  900
ATEESNATNI SNMPLGRVSS QAELSEVVDD WEKAYDSENI Q
Functional Description ? help Back to Top
Source Description
UniProtMediates E2-dependent ubiquitination (By similarity). Confers resistance to osmotic stress such as high salinity. Promotes H(2)O(2) production. Negative regulator of some defense-related genes via an salicylic acid (SA)-dependent signaling pathway. Confers susceptibility to the compatible phytopathogen Pseudomonas syringae pv. tomato strain DC3000 (Pst DC3000). Mediates resistance to type A trichothecenes (phytotoxins produced by phytopathogenic fungi). {ECO:0000250, ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By brassinosteroids, osmotic stress and high salinity. Accumulates in response to SA, ethylene, methyl jasmonate (MeJA), flagellin (e.g. flg22), and type A trichothecenes such as T-2 toxin and diacetoxyscirpenol (DAS), but not in response to type B trichothecenes such as deoxynivalenol (DON). {ECO:0000269|PubMed:16905136, ECO:0000269|PubMed:18069941, ECO:0000269|PubMed:19704430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020539889.10.0NF-X1-type zinc finger protein NFXL1
RefseqXP_020539890.10.0NF-X1-type zinc finger protein NFXL1
SwissprotQ9SY590.0NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
TrEMBLA0A067JXU30.0A0A067JXU3_JATCU; Uncharacterized protein
STRINGcassava4.1_000626m0.0(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF69723145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10170.10.0NF-X-like 1